RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
TUBA1C-209ENST00000552448 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
TUBA1C-209ENST00000552448 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
TUBA1C-209ENST00000552448 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
TUBA1C-209ENST00000552448 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
TUBA1C-209ENST00000552448 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
TUBA1C-209ENST00000552448 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
TUBA1C-209ENST00000552448 ABCC9O60706 1549 aa19.35■□□□□ 0.69
TUBA1C-209ENST00000552448 NACADO15069 1562 aa19.23■□□□□ 0.67
TUBA1C-209ENST00000552448 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
TUBA1C-209ENST00000552448 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
TUBA1C-209ENST00000552448 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
TUBA1C-209ENST00000552448 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
TUBA1C-209ENST00000552448 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
TUBA1C-209ENST00000552448 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
TUBA1C-209ENST00000552448 HRCP23327 699 aa18.31■□□□□ 0.52
TUBA1C-209ENST00000552448 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
TUBA1C-209ENST00000552448 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
TUBA1C-209ENST00000552448 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
TUBA1C-209ENST00000552448 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
TUBA1C-209ENST00000552448 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
TUBA1C-209ENST00000552448 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
TUBA1C-209ENST00000552448 PELP1Q8IZL8 1130 aaKnown RBP18.14■□□□□ 0.5
TUBA1C-209ENST00000552448 WIZO95785 1651 aa18.08■□□□□ 0.49
TUBA1C-209ENST00000552448 PEG3Q9GZU2 1588 aa18.01■□□□□ 0.47
TUBA1C-209ENST00000552448 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
TUBA1C-209ENST00000552448 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
TUBA1C-209ENST00000552448 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
TUBA1C-209ENST00000552448 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
TUBA1C-209ENST00000552448 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
TUBA1C-209ENST00000552448 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
TUBA1C-209ENST00000552448 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
TUBA1C-209ENST00000552448 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
TUBA1C-209ENST00000552448 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
TUBA1C-209ENST00000552448 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
TUBA1C-209ENST00000552448 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
TUBA1C-209ENST00000552448 MYT1Q01538 1121 aa17.62■□□□□ 0.41
TUBA1C-209ENST00000552448 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
TUBA1C-209ENST00000552448 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
TUBA1C-209ENST00000552448 ZEB1P37275 1124 aaPredicted RBP17.48■□□□□ 0.39
TUBA1C-209ENST00000552448 FAM9AQ8IZU1 332 aaPredicted RBP17.42■□□□□ 0.38
TUBA1C-209ENST00000552448 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
TUBA1C-209ENST00000552448 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
TUBA1C-209ENST00000552448 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
TUBA1C-209ENST00000552448 CFTRP13569 1480 aa17.32■□□□□ 0.36
TUBA1C-209ENST00000552448 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.356e-8■■□□□ 13.6
TUBA1C-209ENST00000552448 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
TUBA1C-209ENST00000552448 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
TUBA1C-209ENST00000552448 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
TUBA1C-209ENST00000552448 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
TUBA1C-209ENST00000552448 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
TUBA1C-209ENST00000552448 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
TUBA1C-209ENST00000552448 SOGA1O94964 1423 aa17.15■□□□□ 0.34
TUBA1C-209ENST00000552448 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
TUBA1C-209ENST00000552448 EEA1Q15075 1411 aa17.13■□□□□ 0.33
TUBA1C-209ENST00000552448 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.33
TUBA1C-209ENST00000552448 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
TUBA1C-209ENST00000552448 CUX1P39880 1505 aa17.04■□□□□ 0.32
TUBA1C-209ENST00000552448 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
TUBA1C-209ENST00000552448 NESP48681 1621 aa16.99■□□□□ 0.31
TUBA1C-209ENST00000552448 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
TUBA1C-209ENST00000552448 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
TUBA1C-209ENST00000552448 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
TUBA1C-209ENST00000552448 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
TUBA1C-209ENST00000552448 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
TUBA1C-209ENST00000552448 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
TUBA1C-209ENST00000552448 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
TUBA1C-209ENST00000552448 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
TUBA1C-209ENST00000552448 KIF21BO75037 1637 aa16.9■□□□□ 0.3
TUBA1C-209ENST00000552448 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
TUBA1C-209ENST00000552448 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
TUBA1C-209ENST00000552448 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
TUBA1C-209ENST00000552448 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
TUBA1C-209ENST00000552448 KIF27Q86VH2 1401 aa16.85■□□□□ 0.29
TUBA1C-209ENST00000552448 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
TUBA1C-209ENST00000552448 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
TUBA1C-209ENST00000552448 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
TUBA1C-209ENST00000552448 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
TUBA1C-209ENST00000552448 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
TUBA1C-209ENST00000552448 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
TUBA1C-209ENST00000552448 CUX2O14529 1486 aa16.75■□□□□ 0.27
TUBA1C-209ENST00000552448 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
TUBA1C-209ENST00000552448 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
TUBA1C-209ENST00000552448 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
TUBA1C-209ENST00000552448 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
TUBA1C-209ENST00000552448 CLIP1P30622 1438 aa16.7■□□□□ 0.26
TUBA1C-209ENST00000552448 WDR62O43379 1518 aa16.67■□□□□ 0.26
TUBA1C-209ENST00000552448 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
TUBA1C-209ENST00000552448 GTF3C3Q9Y5Q9 886 aa16.66■□□□□ 0.26
TUBA1C-209ENST00000552448 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
TUBA1C-209ENST00000552448 IGF1RP08069 1367 aa16.64■□□□□ 0.25
TUBA1C-209ENST00000552448 CUL7Q14999 1698 aa16.63■□□□□ 0.25
TUBA1C-209ENST00000552448 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
TUBA1C-209ENST00000552448 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
TUBA1C-209ENST00000552448 TTBK1Q5TCY1 1321 aaPredicted RBP16.61■□□□□ 0.25
TUBA1C-209ENST00000552448 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
TUBA1C-209ENST00000552448 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
TUBA1C-209ENST00000552448 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
TUBA1C-209ENST00000552448 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
TUBA1C-209ENST00000552448 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms