RNA–Protein interactions for RNA: ENST00000561857.1

SPN-204, Transcript of sialophorin, humanhuman

Gene SPN, Length 2,077 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-204ENST00000561857 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
SPN-204ENST00000561857 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
SPN-204ENST00000561857 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
SPN-204ENST00000561857 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
SPN-204ENST00000561857 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
SPN-204ENST00000561857 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
SPN-204ENST00000561857 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
SPN-204ENST00000561857 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
SPN-204ENST00000561857 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
SPN-204ENST00000561857 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
SPN-204ENST00000561857 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
SPN-204ENST00000561857 ABCC9O60706 1549 aa18.91■□□□□ 0.62
SPN-204ENST00000561857 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
SPN-204ENST00000561857 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
SPN-204ENST00000561857 NACADO15069 1562 aa18.65■□□□□ 0.58
SPN-204ENST00000561857 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
SPN-204ENST00000561857 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
SPN-204ENST00000561857 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
SPN-204ENST00000561857 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
SPN-204ENST00000561857 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
SPN-204ENST00000561857 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
SPN-204ENST00000561857 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
SPN-204ENST00000561857 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
SPN-204ENST00000561857 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPN-204ENST00000561857 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
SPN-204ENST00000561857 FOXD1Q16676 465 aa17.9■□□□□ 0.46
SPN-204ENST00000561857 WIZO95785 1651 aa17.82■□□□□ 0.44
SPN-204ENST00000561857 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
SPN-204ENST00000561857 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
SPN-204ENST00000561857 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
SPN-204ENST00000561857 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
SPN-204ENST00000561857 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
SPN-204ENST00000561857 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
SPN-204ENST00000561857 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
SPN-204ENST00000561857 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
SPN-204ENST00000561857 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
SPN-204ENST00000561857 ADRA2BP18089 450 aa17.43■□□□□ 0.38
SPN-204ENST00000561857 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
SPN-204ENST00000561857 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
SPN-204ENST00000561857 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
SPN-204ENST00000561857 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SPN-204ENST00000561857 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
SPN-204ENST00000561857 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
SPN-204ENST00000561857 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
SPN-204ENST00000561857 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
SPN-204ENST00000561857 EEA1Q15075 1411 aa17.13■□□□□ 0.33
SPN-204ENST00000561857 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
SPN-204ENST00000561857 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
SPN-204ENST00000561857 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
SPN-204ENST00000561857 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
SPN-204ENST00000561857 HRCP23327 699 aa17.03■□□□□ 0.32
SPN-204ENST00000561857 SYNJ1O43426 1573 aa17■□□□□ 0.31
SPN-204ENST00000561857 SOGA1O94964 1423 aa16.99■□□□□ 0.31
SPN-204ENST00000561857 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
SPN-204ENST00000561857 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
SPN-204ENST00000561857 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
SPN-204ENST00000561857 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
SPN-204ENST00000561857 CFTRP13569 1480 aa16.9■□□□□ 0.3
SPN-204ENST00000561857 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
SPN-204ENST00000561857 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
SPN-204ENST00000561857 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
SPN-204ENST00000561857 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
SPN-204ENST00000561857 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
SPN-204ENST00000561857 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
SPN-204ENST00000561857 CEP162Q5TB80 1403 aa16.83■□□□□ 0.29
SPN-204ENST00000561857 MYT1Q01538 1121 aa16.82■□□□□ 0.28
SPN-204ENST00000561857 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
SPN-204ENST00000561857 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
SPN-204ENST00000561857 CUX1P39880 1505 aa16.74■□□□□ 0.27
SPN-204ENST00000561857 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
SPN-204ENST00000561857 KCNA4P22459 653 aa16.71■□□□□ 0.27
SPN-204ENST00000561857 APLP2Q06481 763 aa16.7■□□□□ 0.26
SPN-204ENST00000561857 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
SPN-204ENST00000561857 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
SPN-204ENST00000561857 NESP48681 1621 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
SPN-204ENST00000561857 CLIP1P30622 1438 aa16.6■□□□□ 0.25
SPN-204ENST00000561857 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
SPN-204ENST00000561857 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
SPN-204ENST00000561857 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
SPN-204ENST00000561857 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
SPN-204ENST00000561857 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
SPN-204ENST00000561857 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.23
SPN-204ENST00000561857 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
SPN-204ENST00000561857 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
SPN-204ENST00000561857 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
SPN-204ENST00000561857 CUX2O14529 1486 aa16.45■□□□□ 0.22
SPN-204ENST00000561857 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
SPN-204ENST00000561857 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
SPN-204ENST00000561857 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SPN-204ENST00000561857 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
SPN-204ENST00000561857 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
SPN-204ENST00000561857 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
SPN-204ENST00000561857 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
SPN-204ENST00000561857 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms