RNA–Protein interactions for RNA: ENST00000481037.5

RBM39-232, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-232ENST00000481037 AEBP2Q6ZN18 517 aaPredicted RBP36.71■■■■□ 3.47
RBM39-232ENST00000481037 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
RBM39-232ENST00000481037 SENP3Q9H4L4 574 aaPredicted RBP31.33■■■□□ 2.61
RBM39-232ENST00000481037 PHF23Q9BUL5 403 aaPredicted RBP30.92■■■□□ 2.54
RBM39-232ENST00000481037 FOXD1Q16676 465 aa29.14■■■□□ 2.26
RBM39-232ENST00000481037 PLPPR3Q6T4P5 718 aa28.16■■■□□ 2.1
RBM39-232ENST00000481037 PPP6R1Q9UPN7 881 aa27.38■■□□□ 1.97
RBM39-232ENST00000481037 ADRA2BP18089 450 aa27.3■■□□□ 1.96
RBM39-232ENST00000481037 PIAS4Q8N2W9 510 aaPredicted RBP27.29■■□□□ 1.96
RBM39-232ENST00000481037 MSH5O43196 834 aa27.23■■□□□ 1.95
RBM39-232ENST00000481037 POTEDQ86YR6 584 aa26.17■■□□□ 1.78
RBM39-232ENST00000481037 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
RBM39-232ENST00000481037 MAPK8IP2Q13387 824 aaPredicted RBP25.01■■□□□ 1.59
RBM39-232ENST00000481037 DMRT2Q9Y5R5 561 aa24.88■■□□□ 1.57
RBM39-232ENST00000481037 PPP4R3CPQ6ZMV5 832 aa24.69■■□□□ 1.54
RBM39-232ENST00000481037 CNKSR2Q8WXI2 1034 aa24.19■■□□□ 1.46
RBM39-232ENST00000481037 HOXD11P31277 338 aaPredicted RBP24.05■■□□□ 1.44
RBM39-232ENST00000481037 RNF216Q9NWF9 866 aaPredicted RBP23.93■■□□□ 1.42
RBM39-232ENST00000481037 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
RBM39-232ENST00000481037 DCAF8L1A6NGE4 600 aa23.79■■□□□ 1.4
RBM39-232ENST00000481037 NPM3O75607 178 aaKnown RBP23.47■■□□□ 1.35
RBM39-232ENST00000481037 RNF39Q9H2S5 420 aa23.24■■□□□ 1.31
RBM39-232ENST00000481037 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
RBM39-232ENST00000481037 KCNA4P22459 653 aa23.19■■□□□ 1.3
RBM39-232ENST00000481037 CACNB1Q02641 598 aaPredicted RBP23.19■■□□□ 1.3
RBM39-232ENST00000481037 C1QBPQ07021 282 aaKnown RBP22.93■■□□□ 1.26
RBM39-232ENST00000481037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.251e-13■■□□□ 11.5
RBM39-232ENST00000481037 U3KPZ7 1027 aaPredicted RBP22.44■■□□□ 1.18
RBM39-232ENST00000481037 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
RBM39-232ENST00000481037 SPINK5Q9NQ38 1064 aaPredicted RBP22.03■■□□□ 1.12
RBM39-232ENST00000481037 CAPN15O75808 1086 aa21.99■■□□□ 1.11
RBM39-232ENST00000481037 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
RBM39-232ENST00000481037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
RBM39-232ENST00000481037 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
RBM39-232ENST00000481037 APLP2Q06481 763 aa21.89■■□□□ 1.09
RBM39-232ENST00000481037 DSG3P32926 999 aa21.82■■□□□ 1.08
RBM39-232ENST00000481037 SAMD1Q6SPF0 538 aaPredicted RBP21.79■■□□□ 1.08
RBM39-232ENST00000481037 MYCNP04198 464 aaPredicted RBP21.73■■□□□ 1.07
RBM39-232ENST00000481037 ZNF219Q9P2Y4 722 aaPredicted RBP21.7■■□□□ 1.06
RBM39-232ENST00000481037 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
RBM39-232ENST00000481037 FOXD4L1Q9NU39 408 aa21.61■■□□□ 1.05
RBM39-232ENST00000481037 ABCB7O75027 752 aa21.49■■□□□ 1.03
RBM39-232ENST00000481037 ZBTB22O15209 634 aa21.32■■□□□ 1
RBM39-232ENST00000481037 POLA2Q14181 598 aa21.15■□□□□ 0.98
RBM39-232ENST00000481037 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
RBM39-232ENST00000481037 ATXN8OSP0DMR3 200 aa20.94■□□□□ 0.94
RBM39-232ENST00000481037 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
RBM39-232ENST00000481037 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
RBM39-232ENST00000481037 POTEHQ6S545 545 aa20.56■□□□□ 0.88
RBM39-232ENST00000481037 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
RBM39-232ENST00000481037 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
RBM39-232ENST00000481037 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
RBM39-232ENST00000481037 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
RBM39-232ENST00000481037 FBLN2P98095 1184 aa20.36■□□□□ 0.85
RBM39-232ENST00000481037 CHRDL2Q6WN34 429 aa20.28■□□□□ 0.84
RBM39-232ENST00000481037 MKRN4PQ13434 485 aaPredicted RBP20.21■□□□□ 0.83
RBM39-232ENST00000481037 REM2Q8IYK8 340 aaPredicted RBP20.19■□□□□ 0.82
RBM39-232ENST00000481037 SPDYE2BA6NHP3 402 aa20.16■□□□□ 0.82
RBM39-232ENST00000481037 SPDYE6P0CI01 402 aa20.16■□□□□ 0.82
RBM39-232ENST00000481037 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
RBM39-232ENST00000481037 PITPNM1O00562 1244 aa19.97■□□□□ 0.79
RBM39-232ENST00000481037 ZNF692Q9BU19 519 aaPredicted RBP19.92■□□□□ 0.78
RBM39-232ENST00000481037 SSUH2Q9Y2M2 353 aa19.91■□□□□ 0.78
RBM39-232ENST00000481037 PIP4P2Q8N4L2 257 aa19.83■□□□□ 0.77
RBM39-232ENST00000481037 FXR2P51116 673 aaKnown RBP eCLIP19.77■□□□□ 0.767e-33■■□□□ 11.8
RBM39-232ENST00000481037 SPDYE1Q8NFV5 336 aaPredicted RBP19.75■□□□□ 0.75
RBM39-232ENST00000481037 CLEC11AQ9Y240 323 aa19.67■□□□□ 0.74
RBM39-232ENST00000481037 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
RBM39-232ENST00000481037 PRKAR2AP13861 404 aaKnown RBP19.46■□□□□ 0.71
RBM39-232ENST00000481037 HAX1O00165 279 aa19.4■□□□□ 0.7
RBM39-232ENST00000481037 PRR29P0C7W0 189 aa19.39■□□□□ 0.69
RBM39-232ENST00000481037 SP7Q8TDD2 431 aaPredicted RBP19.38■□□□□ 0.69
RBM39-232ENST00000481037 SPDYE4A6NLX3 237 aa19.37■□□□□ 0.69
RBM39-232ENST00000481037 CHADLQ6NUI6 762 aa19.26■□□□□ 0.67
RBM39-232ENST00000481037 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
RBM39-232ENST00000481037 EVX2Q03828 476 aa19.16■□□□□ 0.66
RBM39-232ENST00000481037 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
RBM39-232ENST00000481037 FARP1Q9Y4F1 1045 aaPredicted RBP19.03■□□□□ 0.64
RBM39-232ENST00000481037 PROM2Q8N271 834 aa18.97■□□□□ 0.63
RBM39-232ENST00000481037 CREBZFQ9NS37 354 aa18.96■□□□□ 0.63
RBM39-232ENST00000481037 CD44P16070 742 aaKnown RBP18.86■□□□□ 0.61
RBM39-232ENST00000481037 GABBR2O75899 941 aa18.77■□□□□ 0.6
RBM39-232ENST00000481037 MNX1P50219 401 aaPredicted RBP18.67■□□□□ 0.58
RBM39-232ENST00000481037 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
RBM39-232ENST00000481037 CLCN6P51797 869 aa18.62■□□□□ 0.57
RBM39-232ENST00000481037 FKBP8Q14318 412 aa18.62■□□□□ 0.57
RBM39-232ENST00000481037 ZRANB1Q9UGI0 708 aa18.62■□□□□ 0.57
RBM39-232ENST00000481037 ZNF579Q8NAF0 562 aaKnown RBP18.6■□□□□ 0.57
RBM39-232ENST00000481037 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
RBM39-232ENST00000481037 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
RBM39-232ENST00000481037 MIER1Q8N108 512 aa18.45■□□□□ 0.54
RBM39-232ENST00000481037 PHF12Q96QT6 1004 aa18.37■□□□□ 0.53
RBM39-232ENST00000481037 POTEIP0CG38 1075 aa18.36■□□□□ 0.53
RBM39-232ENST00000481037 PLCD3Q8N3E9 789 aa18.34■□□□□ 0.53
RBM39-232ENST00000481037 GALR2O43603 387 aaPredicted RBP18.32■□□□□ 0.52
RBM39-232ENST00000481037 DCBLD2Q96PD2 775 aa18.32■□□□□ 0.52
RBM39-232ENST00000481037 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.52
RBM39-232ENST00000481037 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
RBM39-232ENST00000481037 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
RBM39-232ENST00000481037 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms