RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
CHD2-216ENST00000629104 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
CHD2-216ENST00000629104 ABCC9O60706 1549 aa18.6■□□□□ 0.57
CHD2-216ENST00000629104 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
CHD2-216ENST00000629104 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
CHD2-216ENST00000629104 NACADO15069 1562 aa17.94■□□□□ 0.46
CHD2-216ENST00000629104 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
CHD2-216ENST00000629104 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
CHD2-216ENST00000629104 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
CHD2-216ENST00000629104 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
CHD2-216ENST00000629104 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
CHD2-216ENST00000629104 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
CHD2-216ENST00000629104 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
CHD2-216ENST00000629104 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
CHD2-216ENST00000629104 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHD2-216ENST00000629104 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
CHD2-216ENST00000629104 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
CHD2-216ENST00000629104 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
CHD2-216ENST00000629104 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
CHD2-216ENST00000629104 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
CHD2-216ENST00000629104 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
CHD2-216ENST00000629104 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
CHD2-216ENST00000629104 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
CHD2-216ENST00000629104 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
CHD2-216ENST00000629104 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CHD2-216ENST00000629104 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
CHD2-216ENST00000629104 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
CHD2-216ENST00000629104 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
CHD2-216ENST00000629104 WIZO95785 1651 aa16.43■□□□□ 0.22
CHD2-216ENST00000629104 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
CHD2-216ENST00000629104 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
CHD2-216ENST00000629104 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
CHD2-216ENST00000629104 NESP48681 1621 aa16.12■□□□□ 0.17
CHD2-216ENST00000629104 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
CHD2-216ENST00000629104 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
CHD2-216ENST00000629104 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
CHD2-216ENST00000629104 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
CHD2-216ENST00000629104 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
CHD2-216ENST00000629104 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
CHD2-216ENST00000629104 CFTRP13569 1480 aa15.98■□□□□ 0.15
CHD2-216ENST00000629104 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
CHD2-216ENST00000629104 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
CHD2-216ENST00000629104 THOC2Q8NI27 1593 aaKnown RBP15.9■□□□□ 0.14
CHD2-216ENST00000629104 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
CHD2-216ENST00000629104 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
CHD2-216ENST00000629104 CUX2O14529 1486 aa15.84■□□□□ 0.13
CHD2-216ENST00000629104 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
CHD2-216ENST00000629104 WDR62O43379 1518 aa15.78■□□□□ 0.12
CHD2-216ENST00000629104 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
CHD2-216ENST00000629104 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
CHD2-216ENST00000629104 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
CHD2-216ENST00000629104 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
CHD2-216ENST00000629104 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
CHD2-216ENST00000629104 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
CHD2-216ENST00000629104 CUX1P39880 1505 aa15.55■□□□□ 0.08
CHD2-216ENST00000629104 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
CHD2-216ENST00000629104 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
CHD2-216ENST00000629104 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
CHD2-216ENST00000629104 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
CHD2-216ENST00000629104 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.07
CHD2-216ENST00000629104 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
CHD2-216ENST00000629104 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
CHD2-216ENST00000629104 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
CHD2-216ENST00000629104 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
CHD2-216ENST00000629104 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
CHD2-216ENST00000629104 SOGA1O94964 1423 aa15.43■□□□□ 0.06
CHD2-216ENST00000629104 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
CHD2-216ENST00000629104 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
CHD2-216ENST00000629104 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.051e-9■■■■□ 24.8
CHD2-216ENST00000629104 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
CHD2-216ENST00000629104 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CHD2-216ENST00000629104 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
CHD2-216ENST00000629104 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
CHD2-216ENST00000629104 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
CHD2-216ENST00000629104 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
CHD2-216ENST00000629104 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
CHD2-216ENST00000629104 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
CHD2-216ENST00000629104 CHD1O14646 1710 aa15.23■□□□□ 0.03
CHD2-216ENST00000629104 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
CHD2-216ENST00000629104 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CHD2-216ENST00000629104 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
CHD2-216ENST00000629104 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
CHD2-216ENST00000629104 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
CHD2-216ENST00000629104 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CHD2-216ENST00000629104 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
CHD2-216ENST00000629104 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
CHD2-216ENST00000629104 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
CHD2-216ENST00000629104 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
CHD2-216ENST00000629104 GRIN2AQ12879 1464 aa15.06■□□□□ 0
CHD2-216ENST00000629104 CUL7Q14999 1698 aa15.06■□□□□ 0
CHD2-216ENST00000629104 IGF1RP08069 1367 aa15.05■□□□□ -0
CHD2-216ENST00000629104 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
CHD2-216ENST00000629104 RUSC2Q8N2Y8 1516 aa15.02□□□□□ -0.01
CHD2-216ENST00000629104 CEP170Q5SW79 1584 aa15□□□□□ -0.01
CHD2-216ENST00000629104 NUP160Q12769 1436 aa14.99□□□□□ -0.01
CHD2-216ENST00000629104 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
CHD2-216ENST00000629104 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
CHD2-216ENST00000629104 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
CHD2-216ENST00000629104 ARHGEF11O15085 1522 aa14.96□□□□□ -0.02
CHD2-216ENST00000629104 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms