RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
CNOT2-208ENST00000548021 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
CNOT2-208ENST00000548021 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
CNOT2-208ENST00000548021 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.24
CNOT2-208ENST00000548021 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
CNOT2-208ENST00000548021 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
CNOT2-208ENST00000548021 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
CNOT2-208ENST00000548021 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
CNOT2-208ENST00000548021 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
CNOT2-208ENST00000548021 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
CNOT2-208ENST00000548021 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
CNOT2-208ENST00000548021 ABCC9O60706 1549 aa15.34■□□□□ 0.05
CNOT2-208ENST00000548021 NACADO15069 1562 aa15.26■□□□□ 0.03
CNOT2-208ENST00000548021 SCRIBQ14160 1630 aa15.21■□□□□ 0.02
CNOT2-208ENST00000548021 FOXD1Q16676 465 aa15.2■□□□□ 0.02
CNOT2-208ENST00000548021 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
CNOT2-208ENST00000548021 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
CNOT2-208ENST00000548021 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
CNOT2-208ENST00000548021 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
CNOT2-208ENST00000548021 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
CNOT2-208ENST00000548021 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
CNOT2-208ENST00000548021 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
CNOT2-208ENST00000548021 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
CNOT2-208ENST00000548021 WIZO95785 1651 aa14.62□□□□□ -0.07
CNOT2-208ENST00000548021 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
CNOT2-208ENST00000548021 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
CNOT2-208ENST00000548021 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
CNOT2-208ENST00000548021 MSH5O43196 834 aa14.45□□□□□ -0.1
CNOT2-208ENST00000548021 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
CNOT2-208ENST00000548021 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
CNOT2-208ENST00000548021 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
CNOT2-208ENST00000548021 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
CNOT2-208ENST00000548021 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
CNOT2-208ENST00000548021 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
CNOT2-208ENST00000548021 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
CNOT2-208ENST00000548021 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
CNOT2-208ENST00000548021 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
CNOT2-208ENST00000548021 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
CNOT2-208ENST00000548021 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
CNOT2-208ENST00000548021 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
CNOT2-208ENST00000548021 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
CNOT2-208ENST00000548021 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
CNOT2-208ENST00000548021 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
CNOT2-208ENST00000548021 ADRA2BP18089 450 aa13.93□□□□□ -0.18
CNOT2-208ENST00000548021 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
CNOT2-208ENST00000548021 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
CNOT2-208ENST00000548021 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
CNOT2-208ENST00000548021 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
CNOT2-208ENST00000548021 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
CNOT2-208ENST00000548021 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
CNOT2-208ENST00000548021 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
CNOT2-208ENST00000548021 SOGA1O94964 1423 aa13.81□□□□□ -0.2
CNOT2-208ENST00000548021 CFTRP13569 1480 aa13.81□□□□□ -0.2
CNOT2-208ENST00000548021 EEA1Q15075 1411 aa13.8□□□□□ -0.2
CNOT2-208ENST00000548021 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
CNOT2-208ENST00000548021 CUX1P39880 1505 aa13.74□□□□□ -0.21
CNOT2-208ENST00000548021 KIF21BO75037 1637 aa13.71□□□□□ -0.22
CNOT2-208ENST00000548021 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
CNOT2-208ENST00000548021 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
CNOT2-208ENST00000548021 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
CNOT2-208ENST00000548021 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
CNOT2-208ENST00000548021 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
CNOT2-208ENST00000548021 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
CNOT2-208ENST00000548021 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
CNOT2-208ENST00000548021 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
CNOT2-208ENST00000548021 NESP48681 1621 aa13.57□□□□□ -0.24
CNOT2-208ENST00000548021 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
CNOT2-208ENST00000548021 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
CNOT2-208ENST00000548021 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CNOT2-208ENST00000548021 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
CNOT2-208ENST00000548021 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
CNOT2-208ENST00000548021 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
CNOT2-208ENST00000548021 PRXQ9BXM0 1461 aa13.52□□□□□ -0.25
CNOT2-208ENST00000548021 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
CNOT2-208ENST00000548021 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
CNOT2-208ENST00000548021 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
CNOT2-208ENST00000548021 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
CNOT2-208ENST00000548021 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
CNOT2-208ENST00000548021 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
CNOT2-208ENST00000548021 CUX2O14529 1486 aa13.45□□□□□ -0.26
CNOT2-208ENST00000548021 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
CNOT2-208ENST00000548021 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
CNOT2-208ENST00000548021 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
CNOT2-208ENST00000548021 CLIP1P30622 1438 aa13.42□□□□□ -0.26
CNOT2-208ENST00000548021 ABCA10Q8WWZ4 1543 aa13.4□□□□□ -0.26
CNOT2-208ENST00000548021 HRCP23327 699 aa13.39□□□□□ -0.27
CNOT2-208ENST00000548021 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
CNOT2-208ENST00000548021 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
CNOT2-208ENST00000548021 IGF1RP08069 1367 aa13.35□□□□□ -0.27
CNOT2-208ENST00000548021 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
CNOT2-208ENST00000548021 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
CNOT2-208ENST00000548021 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
CNOT2-208ENST00000548021 CUL7Q14999 1698 aa13.34□□□□□ -0.27
CNOT2-208ENST00000548021 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
CNOT2-208ENST00000548021 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
CNOT2-208ENST00000548021 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
CNOT2-208ENST00000548021 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
CNOT2-208ENST00000548021 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
CNOT2-208ENST00000548021 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
CNOT2-208ENST00000548021 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms