RNA–Protein interactions for RNA: ENST00000550641.5

CNOT2-225, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-225ENST00000550641 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
CNOT2-225ENST00000550641 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
CNOT2-225ENST00000550641 ABCC9O60706 1549 aa17.58■□□□□ 0.41
CNOT2-225ENST00000550641 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
CNOT2-225ENST00000550641 NACADO15069 1562 aa16.68■□□□□ 0.26
CNOT2-225ENST00000550641 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
CNOT2-225ENST00000550641 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
CNOT2-225ENST00000550641 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.23
CNOT2-225ENST00000550641 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
CNOT2-225ENST00000550641 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
CNOT2-225ENST00000550641 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNOT2-225ENST00000550641 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
CNOT2-225ENST00000550641 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
CNOT2-225ENST00000550641 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
CNOT2-225ENST00000550641 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
CNOT2-225ENST00000550641 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
CNOT2-225ENST00000550641 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
CNOT2-225ENST00000550641 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
CNOT2-225ENST00000550641 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-225ENST00000550641 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
CNOT2-225ENST00000550641 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
CNOT2-225ENST00000550641 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
CNOT2-225ENST00000550641 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
CNOT2-225ENST00000550641 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
CNOT2-225ENST00000550641 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
CNOT2-225ENST00000550641 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
CNOT2-225ENST00000550641 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
CNOT2-225ENST00000550641 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
CNOT2-225ENST00000550641 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
CNOT2-225ENST00000550641 NESP48681 1621 aa15.2■□□□□ 0.02
CNOT2-225ENST00000550641 WIZO95785 1651 aa15.16■□□□□ 0.02
CNOT2-225ENST00000550641 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
CNOT2-225ENST00000550641 ERCC6Q03468 1493 aa15.08■□□□□ 0
CNOT2-225ENST00000550641 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
CNOT2-225ENST00000550641 LAMC3Q9Y6N6 1575 aa15.02■□□□□ -0
CNOT2-225ENST00000550641 CUX2O14529 1486 aa15.01□□□□□ -0.01
CNOT2-225ENST00000550641 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
CNOT2-225ENST00000550641 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
CNOT2-225ENST00000550641 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
CNOT2-225ENST00000550641 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
CNOT2-225ENST00000550641 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
CNOT2-225ENST00000550641 CFTRP13569 1480 aa14.85□□□□□ -0.03
CNOT2-225ENST00000550641 DNAJC5Q9H3Z4 198 aa14.85□□□□□ -0.03
CNOT2-225ENST00000550641 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
CNOT2-225ENST00000550641 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
CNOT2-225ENST00000550641 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
CNOT2-225ENST00000550641 WDR62O43379 1518 aa14.79□□□□□ -0.04
CNOT2-225ENST00000550641 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
CNOT2-225ENST00000550641 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.05
CNOT2-225ENST00000550641 PRDM2Q13029 1718 aa14.67□□□□□ -0.06
CNOT2-225ENST00000550641 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
CNOT2-225ENST00000550641 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-225ENST00000550641 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
CNOT2-225ENST00000550641 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
CNOT2-225ENST00000550641 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
CNOT2-225ENST00000550641 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
CNOT2-225ENST00000550641 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
CNOT2-225ENST00000550641 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
CNOT2-225ENST00000550641 CUX1P39880 1505 aa14.4□□□□□ -0.1
CNOT2-225ENST00000550641 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
CNOT2-225ENST00000550641 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
CNOT2-225ENST00000550641 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
CNOT2-225ENST00000550641 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
CNOT2-225ENST00000550641 SOGA1O94964 1423 aa14.32□□□□□ -0.12
CNOT2-225ENST00000550641 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
CNOT2-225ENST00000550641 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
CNOT2-225ENST00000550641 CHD1O14646 1710 aa14.25□□□□□ -0.13
CNOT2-225ENST00000550641 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
CNOT2-225ENST00000550641 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
CNOT2-225ENST00000550641 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
CNOT2-225ENST00000550641 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
CNOT2-225ENST00000550641 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
CNOT2-225ENST00000550641 SYNJ1O43426 1573 aa14.21□□□□□ -0.14
CNOT2-225ENST00000550641 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
CNOT2-225ENST00000550641 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
CNOT2-225ENST00000550641 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
CNOT2-225ENST00000550641 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
CNOT2-225ENST00000550641 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
CNOT2-225ENST00000550641 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
CNOT2-225ENST00000550641 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
CNOT2-225ENST00000550641 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
CNOT2-225ENST00000550641 FBLN2P98095 1184 aa14.15□□□□□ -0.14
CNOT2-225ENST00000550641 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CNOT2-225ENST00000550641 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
CNOT2-225ENST00000550641 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
CNOT2-225ENST00000550641 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
CNOT2-225ENST00000550641 ARAP1Q96P48 1450 aa14.08□□□□□ -0.16
CNOT2-225ENST00000550641 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
CNOT2-225ENST00000550641 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
CNOT2-225ENST00000550641 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
CNOT2-225ENST00000550641 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
CNOT2-225ENST00000550641 CEP170Q5SW79 1584 aa14□□□□□ -0.17
CNOT2-225ENST00000550641 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
CNOT2-225ENST00000550641 ERICH3Q5RHP9 1530 aa13.99□□□□□ -0.17
CNOT2-225ENST00000550641 NUP160Q12769 1436 aa13.98□□□□□ -0.17
CNOT2-225ENST00000550641 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
CNOT2-225ENST00000550641 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
CNOT2-225ENST00000550641 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
CNOT2-225ENST00000550641 IGF1RP08069 1367 aa13.9□□□□□ -0.18
CNOT2-225ENST00000550641 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms