RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
RBM39-212ENST00000429968 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
RBM39-212ENST00000429968 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
RBM39-212ENST00000429968 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
RBM39-212ENST00000429968 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
RBM39-212ENST00000429968 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
RBM39-212ENST00000429968 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
RBM39-212ENST00000429968 ABCC9O60706 1549 aa24.27■■□□□ 1.48
RBM39-212ENST00000429968 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
RBM39-212ENST00000429968 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
RBM39-212ENST00000429968 NACADO15069 1562 aa24■■□□□ 1.43
RBM39-212ENST00000429968 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
RBM39-212ENST00000429968 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
RBM39-212ENST00000429968 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
RBM39-212ENST00000429968 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
RBM39-212ENST00000429968 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
RBM39-212ENST00000429968 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
RBM39-212ENST00000429968 WIZO95785 1651 aa23.42■■□□□ 1.34
RBM39-212ENST00000429968 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
RBM39-212ENST00000429968 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
RBM39-212ENST00000429968 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
RBM39-212ENST00000429968 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
RBM39-212ENST00000429968 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.281e-8■□□□□ 10.4
RBM39-212ENST00000429968 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
RBM39-212ENST00000429968 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
RBM39-212ENST00000429968 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
RBM39-212ENST00000429968 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
RBM39-212ENST00000429968 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
RBM39-212ENST00000429968 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
RBM39-212ENST00000429968 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
RBM39-212ENST00000429968 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
RBM39-212ENST00000429968 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
RBM39-212ENST00000429968 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
RBM39-212ENST00000429968 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
RBM39-212ENST00000429968 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
RBM39-212ENST00000429968 HRCP23327 699 aa22.42■■□□□ 1.18
RBM39-212ENST00000429968 SOGA1O94964 1423 aa22.38■■□□□ 1.17
RBM39-212ENST00000429968 RUSC2Q8N2Y8 1516 aa22.34■■□□□ 1.17
RBM39-212ENST00000429968 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
RBM39-212ENST00000429968 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
RBM39-212ENST00000429968 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
RBM39-212ENST00000429968 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
RBM39-212ENST00000429968 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
RBM39-212ENST00000429968 SLC24A1O60721 1099 aa22.14■■□□□ 1.13
RBM39-212ENST00000429968 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
RBM39-212ENST00000429968 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
RBM39-212ENST00000429968 EEA1Q15075 1411 aa22.1■■□□□ 1.13
RBM39-212ENST00000429968 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
RBM39-212ENST00000429968 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
RBM39-212ENST00000429968 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.11
RBM39-212ENST00000429968 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
RBM39-212ENST00000429968 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
RBM39-212ENST00000429968 KIF21BO75037 1637 aa21.95■■□□□ 1.1
RBM39-212ENST00000429968 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
RBM39-212ENST00000429968 CFTRP13569 1480 aa21.92■■□□□ 1.1
RBM39-212ENST00000429968 CUX1P39880 1505 aa21.92■■□□□ 1.1
RBM39-212ENST00000429968 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
RBM39-212ENST00000429968 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
RBM39-212ENST00000429968 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
RBM39-212ENST00000429968 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
RBM39-212ENST00000429968 TTBK1Q5TCY1 1321 aaPredicted RBP21.81■■□□□ 1.08
RBM39-212ENST00000429968 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
RBM39-212ENST00000429968 CLIP1P30622 1438 aa21.7■■□□□ 1.06
RBM39-212ENST00000429968 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
RBM39-212ENST00000429968 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
RBM39-212ENST00000429968 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
RBM39-212ENST00000429968 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
RBM39-212ENST00000429968 NESP48681 1621 aa21.57■■□□□ 1.04
RBM39-212ENST00000429968 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
RBM39-212ENST00000429968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
RBM39-212ENST00000429968 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
RBM39-212ENST00000429968 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
RBM39-212ENST00000429968 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
RBM39-212ENST00000429968 CUX2O14529 1486 aa21.51■■□□□ 1.03
RBM39-212ENST00000429968 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
RBM39-212ENST00000429968 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
RBM39-212ENST00000429968 IGF1RP08069 1367 aa21.43■■□□□ 1.02
RBM39-212ENST00000429968 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
RBM39-212ENST00000429968 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
RBM39-212ENST00000429968 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
RBM39-212ENST00000429968 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
RBM39-212ENST00000429968 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
RBM39-212ENST00000429968 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
RBM39-212ENST00000429968 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
RBM39-212ENST00000429968 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
RBM39-212ENST00000429968 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
RBM39-212ENST00000429968 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
RBM39-212ENST00000429968 KIF21AQ7Z4S6 1674 aa21.27■■□□□ 1
RBM39-212ENST00000429968 APLP2Q06481 763 aa21.26■□□□□ 0.99
RBM39-212ENST00000429968 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
RBM39-212ENST00000429968 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
RBM39-212ENST00000429968 KANK4Q5T7N3 995 aaPredicted RBP21.26■□□□□ 0.99
RBM39-212ENST00000429968 MYT1Q01538 1121 aa21.21■□□□□ 0.99
RBM39-212ENST00000429968 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
RBM39-212ENST00000429968 CUL7Q14999 1698 aa21.12■□□□□ 0.97
RBM39-212ENST00000429968 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
RBM39-212ENST00000429968 CTTNBP2Q8WZ74 1663 aa21.1■□□□□ 0.97
RBM39-212ENST00000429968 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
RBM39-212ENST00000429968 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
RBM39-212ENST00000429968 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms