RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CNOT2-223ENST00000550160 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
CNOT2-223ENST00000550160 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
CNOT2-223ENST00000550160 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
CNOT2-223ENST00000550160 ABCC9O60706 1549 aa22.73■■□□□ 1.23
CNOT2-223ENST00000550160 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
CNOT2-223ENST00000550160 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
CNOT2-223ENST00000550160 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
CNOT2-223ENST00000550160 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
CNOT2-223ENST00000550160 NACADO15069 1562 aa22.24■■□□□ 1.15
CNOT2-223ENST00000550160 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
CNOT2-223ENST00000550160 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
CNOT2-223ENST00000550160 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
CNOT2-223ENST00000550160 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
CNOT2-223ENST00000550160 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
CNOT2-223ENST00000550160 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
CNOT2-223ENST00000550160 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
CNOT2-223ENST00000550160 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
CNOT2-223ENST00000550160 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
CNOT2-223ENST00000550160 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
CNOT2-223ENST00000550160 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
CNOT2-223ENST00000550160 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
CNOT2-223ENST00000550160 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
CNOT2-223ENST00000550160 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
CNOT2-223ENST00000550160 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
CNOT2-223ENST00000550160 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
CNOT2-223ENST00000550160 WIZO95785 1651 aa20.59■□□□□ 0.89
CNOT2-223ENST00000550160 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
CNOT2-223ENST00000550160 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
CNOT2-223ENST00000550160 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
CNOT2-223ENST00000550160 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
CNOT2-223ENST00000550160 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
CNOT2-223ENST00000550160 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
CNOT2-223ENST00000550160 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
CNOT2-223ENST00000550160 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
CNOT2-223ENST00000550160 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
CNOT2-223ENST00000550160 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
CNOT2-223ENST00000550160 CFTRP13569 1480 aa19.92■□□□□ 0.78
CNOT2-223ENST00000550160 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
CNOT2-223ENST00000550160 NESP48681 1621 aa19.8■□□□□ 0.76
CNOT2-223ENST00000550160 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
CNOT2-223ENST00000550160 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CNOT2-223ENST00000550160 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
CNOT2-223ENST00000550160 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
CNOT2-223ENST00000550160 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
CNOT2-223ENST00000550160 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
CNOT2-223ENST00000550160 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
CNOT2-223ENST00000550160 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
CNOT2-223ENST00000550160 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
CNOT2-223ENST00000550160 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
CNOT2-223ENST00000550160 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
CNOT2-223ENST00000550160 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
CNOT2-223ENST00000550160 CUX1P39880 1505 aa19.48■□□□□ 0.71
CNOT2-223ENST00000550160 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
CNOT2-223ENST00000550160 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
CNOT2-223ENST00000550160 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
CNOT2-223ENST00000550160 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
CNOT2-223ENST00000550160 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
CNOT2-223ENST00000550160 WDR62O43379 1518 aa19.39■□□□□ 0.69
CNOT2-223ENST00000550160 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
CNOT2-223ENST00000550160 FGD5Q6ZNL6 1462 aa19.36■□□□□ 0.69
CNOT2-223ENST00000550160 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
CNOT2-223ENST00000550160 SOGA1O94964 1423 aa19.27■□□□□ 0.68
CNOT2-223ENST00000550160 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
CNOT2-223ENST00000550160 EEA1Q15075 1411 aa19.22■□□□□ 0.67
CNOT2-223ENST00000550160 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
CNOT2-223ENST00000550160 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
CNOT2-223ENST00000550160 CUX2O14529 1486 aa19.2■□□□□ 0.66
CNOT2-223ENST00000550160 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
CNOT2-223ENST00000550160 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
CNOT2-223ENST00000550160 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
CNOT2-223ENST00000550160 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
CNOT2-223ENST00000550160 FOXD1Q16676 465 aa19.09■□□□□ 0.65
CNOT2-223ENST00000550160 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
CNOT2-223ENST00000550160 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
CNOT2-223ENST00000550160 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
CNOT2-223ENST00000550160 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
CNOT2-223ENST00000550160 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
CNOT2-223ENST00000550160 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
CNOT2-223ENST00000550160 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
CNOT2-223ENST00000550160 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
CNOT2-223ENST00000550160 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
CNOT2-223ENST00000550160 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
CNOT2-223ENST00000550160 IGF1RP08069 1367 aa18.98■□□□□ 0.63
CNOT2-223ENST00000550160 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
CNOT2-223ENST00000550160 CUL7Q14999 1698 aa18.93■□□□□ 0.62
CNOT2-223ENST00000550160 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
CNOT2-223ENST00000550160 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
CNOT2-223ENST00000550160 KIF21BO75037 1637 aa18.91■□□□□ 0.62
CNOT2-223ENST00000550160 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
CNOT2-223ENST00000550160 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
CNOT2-223ENST00000550160 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
CNOT2-223ENST00000550160 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
CNOT2-223ENST00000550160 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
CNOT2-223ENST00000550160 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
CNOT2-223ENST00000550160 EHMT2Q96KQ7 1210 aa18.82■□□□□ 0.6
CNOT2-223ENST00000550160 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
CNOT2-223ENST00000550160 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
CNOT2-223ENST00000550160 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
CNOT2-223ENST00000550160 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms