RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
RBM39-218ENST00000449489 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
RBM39-218ENST00000449489 NISCHQ9Y2I1 1504 aa18.97■□□□□ 0.63
RBM39-218ENST00000449489 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
RBM39-218ENST00000449489 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
RBM39-218ENST00000449489 ABCC9O60706 1549 aa17.59■□□□□ 0.41
RBM39-218ENST00000449489 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
RBM39-218ENST00000449489 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
RBM39-218ENST00000449489 FOXD1Q16676 465 aa16.79■□□□□ 0.28
RBM39-218ENST00000449489 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
RBM39-218ENST00000449489 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
RBM39-218ENST00000449489 NACADO15069 1562 aa16.43■□□□□ 0.22
RBM39-218ENST00000449489 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
RBM39-218ENST00000449489 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
RBM39-218ENST00000449489 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
RBM39-218ENST00000449489 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
RBM39-218ENST00000449489 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
RBM39-218ENST00000449489 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
RBM39-218ENST00000449489 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
RBM39-218ENST00000449489 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
RBM39-218ENST00000449489 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
RBM39-218ENST00000449489 MSH5O43196 834 aa15.83■□□□□ 0.12
RBM39-218ENST00000449489 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
RBM39-218ENST00000449489 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
RBM39-218ENST00000449489 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
RBM39-218ENST00000449489 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
RBM39-218ENST00000449489 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
RBM39-218ENST00000449489 ADRA2BP18089 450 aa15.59■□□□□ 0.09
RBM39-218ENST00000449489 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
RBM39-218ENST00000449489 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
RBM39-218ENST00000449489 CUX2O14529 1486 aa15.46■□□□□ 0.06
RBM39-218ENST00000449489 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
RBM39-218ENST00000449489 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
RBM39-218ENST00000449489 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
RBM39-218ENST00000449489 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
RBM39-218ENST00000449489 NESP48681 1621 aa14.98□□□□□ -0.01
RBM39-218ENST00000449489 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
RBM39-218ENST00000449489 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
RBM39-218ENST00000449489 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
RBM39-218ENST00000449489 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
RBM39-218ENST00000449489 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
RBM39-218ENST00000449489 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
RBM39-218ENST00000449489 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
RBM39-218ENST00000449489 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
RBM39-218ENST00000449489 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
RBM39-218ENST00000449489 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
RBM39-218ENST00000449489 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
RBM39-218ENST00000449489 WDR62O43379 1518 aa14.68□□□□□ -0.06
RBM39-218ENST00000449489 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
RBM39-218ENST00000449489 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
RBM39-218ENST00000449489 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
RBM39-218ENST00000449489 KCNA4P22459 653 aa14.53□□□□□ -0.08
RBM39-218ENST00000449489 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
RBM39-218ENST00000449489 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
RBM39-218ENST00000449489 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
RBM39-218ENST00000449489 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
RBM39-218ENST00000449489 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
RBM39-218ENST00000449489 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
RBM39-218ENST00000449489 CFTRP13569 1480 aa14.42□□□□□ -0.1
RBM39-218ENST00000449489 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
RBM39-218ENST00000449489 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
RBM39-218ENST00000449489 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
RBM39-218ENST00000449489 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
RBM39-218ENST00000449489 WIZO95785 1651 aa14.34□□□□□ -0.11
RBM39-218ENST00000449489 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
RBM39-218ENST00000449489 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
RBM39-218ENST00000449489 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
RBM39-218ENST00000449489 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
RBM39-218ENST00000449489 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
RBM39-218ENST00000449489 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
RBM39-218ENST00000449489 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
RBM39-218ENST00000449489 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
RBM39-218ENST00000449489 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
RBM39-218ENST00000449489 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
RBM39-218ENST00000449489 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
RBM39-218ENST00000449489 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
RBM39-218ENST00000449489 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
RBM39-218ENST00000449489 CHD1O14646 1710 aa14.12□□□□□ -0.15
RBM39-218ENST00000449489 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
RBM39-218ENST00000449489 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
RBM39-218ENST00000449489 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.161e-12■■■■□ 23.9
RBM39-218ENST00000449489 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
RBM39-218ENST00000449489 FBLN2P98095 1184 aa14.03□□□□□ -0.16
RBM39-218ENST00000449489 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.16
RBM39-218ENST00000449489 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
RBM39-218ENST00000449489 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
RBM39-218ENST00000449489 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
RBM39-218ENST00000449489 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
RBM39-218ENST00000449489 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
RBM39-218ENST00000449489 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
RBM39-218ENST00000449489 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
RBM39-218ENST00000449489 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
RBM39-218ENST00000449489 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
RBM39-218ENST00000449489 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
RBM39-218ENST00000449489 SOGA1O94964 1423 aa13.9□□□□□ -0.18
RBM39-218ENST00000449489 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
RBM39-218ENST00000449489 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
RBM39-218ENST00000449489 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
RBM39-218ENST00000449489 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
RBM39-218ENST00000449489 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms