Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DUX4L15-201ENST00000611059 1267 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L23-201ENST00000615195 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L24-201ENST00000617576 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L22-201ENST00000618238 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L20-201ENST00000619712 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L21-201ENST00000622058 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L10-201ENST00000622460 1267 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 DUX4L25-201ENST00000624915 1269 ntBASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA3Q9Y5H0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA3Q9Y5H0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA3Q9Y5H0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHGA3Q9Y5H0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHGA3Q9Y5H0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGA3Q9Y5H0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGA3Q9Y5H0 HSD17B1P1-201ENST00000590052 955 ntBASIC25.07■■□□□ 1.6
PCDHGA3Q9Y5H0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGA3Q9Y5H0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA3Q9Y5H0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA3Q9Y5H0 ABCB10P1-201ENST00000614297 2181 ntBASIC25.03■■□□□ 1.6
PCDHGA3Q9Y5H0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA3Q9Y5H0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.03■■□□□ 1.6
PCDHGA3Q9Y5H0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA3Q9Y5H0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
PCDHGA3Q9Y5H0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA3Q9Y5H0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA3Q9Y5H0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA3Q9Y5H0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHGA3Q9Y5H0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA3Q9Y5H0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA3Q9Y5H0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25■■□□□ 1.59
PCDHGA3Q9Y5H0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGA3Q9Y5H0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA3Q9Y5H0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA3Q9Y5H0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA3Q9Y5H0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA3Q9Y5H0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA3Q9Y5H0 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA3Q9Y5H0 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA3Q9Y5H0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA3Q9Y5H0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA3Q9Y5H0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHGA3Q9Y5H0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHGA3Q9Y5H0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA3Q9Y5H0 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.96■■□□□ 1.59
PCDHGA3Q9Y5H0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA3Q9Y5H0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHGA3Q9Y5H0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGA3Q9Y5H0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PCDHGA3Q9Y5H0 ABCB10P3-201ENST00000561950 2166 ntBASIC24.95■■□□□ 1.58
PCDHGA3Q9Y5H0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.94■■□□□ 1.58
PCDHGA3Q9Y5H0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGA3Q9Y5H0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHGA3Q9Y5H0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA3Q9Y5H0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA3Q9Y5H0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PCDHGA3Q9Y5H0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHGA3Q9Y5H0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHGA3Q9Y5H0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
PCDHGA3Q9Y5H0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA3Q9Y5H0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA3Q9Y5H0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA3Q9Y5H0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGA3Q9Y5H0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGA3Q9Y5H0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGA3Q9Y5H0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHGA3Q9Y5H0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDHGA3Q9Y5H0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
PCDHGA3Q9Y5H0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA3Q9Y5H0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA3Q9Y5H0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA3Q9Y5H0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGA3Q9Y5H0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGA3Q9Y5H0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA3Q9Y5H0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGA3Q9Y5H0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA3Q9Y5H0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGA3Q9Y5H0 LINC00273-201ENST00000539813 1452 ntBASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA3Q9Y5H0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA3Q9Y5H0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHGA3Q9Y5H0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms