Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
NUB1Q9Y5A7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NUB1Q9Y5A7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.21■■■□□ 2.11
NUB1Q9Y5A7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NUB1Q9Y5A7 HLA-V-202ENST00000446817 847 ntBASIC28.21■■■□□ 2.11
NUB1Q9Y5A7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NUB1Q9Y5A7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.2■■■□□ 2.11
NUB1Q9Y5A7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.2■■■□□ 2.1
NUB1Q9Y5A7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
NUB1Q9Y5A7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NUB1Q9Y5A7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NUB1Q9Y5A7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.18■■■□□ 2.1
NUB1Q9Y5A7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NUB1Q9Y5A7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NUB1Q9Y5A7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
NUB1Q9Y5A7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NUB1Q9Y5A7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.16■■■□□ 2.1
NUB1Q9Y5A7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NUB1Q9Y5A7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
NUB1Q9Y5A7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.15■■■□□ 2.1
NUB1Q9Y5A7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NUB1Q9Y5A7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
NUB1Q9Y5A7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NUB1Q9Y5A7 LINC01971-201ENST00000617888 1048 ntBASIC28.14■■■□□ 2.1
NUB1Q9Y5A7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
NUB1Q9Y5A7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.12■■■□□ 2.09
NUB1Q9Y5A7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
NUB1Q9Y5A7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NUB1Q9Y5A7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.11■■■□□ 2.09
NUB1Q9Y5A7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
NUB1Q9Y5A7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NUB1Q9Y5A7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NUB1Q9Y5A7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
NUB1Q9Y5A7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
NUB1Q9Y5A7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 DUX4L11-201ENST00000611504 1267 ntBASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 DUX4L12-201ENST00000614593 1267 ntBASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 DUX4L14-201ENST00000621227 1267 ntBASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NUB1Q9Y5A7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NUB1Q9Y5A7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
NUB1Q9Y5A7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.07■■■□□ 2.08
NUB1Q9Y5A7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.07■■■□□ 2.08
NUB1Q9Y5A7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NUB1Q9Y5A7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NUB1Q9Y5A7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.06■■■□□ 2.08
NUB1Q9Y5A7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
NUB1Q9Y5A7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
NUB1Q9Y5A7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NUB1Q9Y5A7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NUB1Q9Y5A7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.05■■■□□ 2.08
NUB1Q9Y5A7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NUB1Q9Y5A7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.04■■■□□ 2.08
NUB1Q9Y5A7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.03■■■□□ 2.08
NUB1Q9Y5A7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.03■■■□□ 2.08
NUB1Q9Y5A7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
NUB1Q9Y5A7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.02■■■□□ 2.08
NUB1Q9Y5A7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.02■■■□□ 2.08
NUB1Q9Y5A7 AC127502.1-201ENST00000399971 1502 ntBASIC28.02■■■□□ 2.08
NUB1Q9Y5A7 ABCB10P3-201ENST00000561950 2166 ntBASIC28.01■■■□□ 2.08
NUB1Q9Y5A7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.01■■■□□ 2.07
NUB1Q9Y5A7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NUB1Q9Y5A7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
NUB1Q9Y5A7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28■■■□□ 2.07
NUB1Q9Y5A7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28■■■□□ 2.07
NUB1Q9Y5A7 MIR3648-2-201ENST00000581792 180 ntBASIC28■■■□□ 2.07
NUB1Q9Y5A7 MIR3648-1-201ENST00000615959 180 ntBASIC28■■■□□ 2.07
NUB1Q9Y5A7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28■■■□□ 2.07
NUB1Q9Y5A7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NUB1Q9Y5A7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28■■■□□ 2.07
NUB1Q9Y5A7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NUB1Q9Y5A7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
NUB1Q9Y5A7 AC139426.1-201ENST00000568218 2529 ntBASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 AC016575.1-201ENST00000607026 382 ntBASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
NUB1Q9Y5A7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.97■■■□□ 2.07
NUB1Q9Y5A7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
NUB1Q9Y5A7 CR559946.2-201ENST00000623684 991 ntBASIC27.96■■■□□ 2.07
NUB1Q9Y5A7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
NUB1Q9Y5A7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
NUB1Q9Y5A7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
NUB1Q9Y5A7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms