Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UBQLN2Q9UHD9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN2Q9UHD9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN2Q9UHD9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN2Q9UHD9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN2Q9UHD9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
UBQLN2Q9UHD9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN2Q9UHD9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN2Q9UHD9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN2Q9UHD9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.7■■□□□ 1.06
UBQLN2Q9UHD9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
UBQLN2Q9UHD9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN2Q9UHD9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN2Q9UHD9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
UBQLN2Q9UHD9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.68■■□□□ 1.06
UBQLN2Q9UHD9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UBQLN2Q9UHD9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UBQLN2Q9UHD9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN2Q9UHD9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.67■■□□□ 1.06
UBQLN2Q9UHD9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UBQLN2Q9UHD9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
UBQLN2Q9UHD9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
UBQLN2Q9UHD9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN2Q9UHD9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.66■■□□□ 1.06
UBQLN2Q9UHD9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN2Q9UHD9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
UBQLN2Q9UHD9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN2Q9UHD9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
UBQLN2Q9UHD9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN2Q9UHD9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN2Q9UHD9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
UBQLN2Q9UHD9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN2Q9UHD9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN2Q9UHD9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN2Q9UHD9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN2Q9UHD9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN2Q9UHD9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN2Q9UHD9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN2Q9UHD9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN2Q9UHD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN2Q9UHD9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN2Q9UHD9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN2Q9UHD9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
UBQLN2Q9UHD9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.58■■□□□ 1.05
UBQLN2Q9UHD9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.58■■□□□ 1.05
UBQLN2Q9UHD9 AC093323.1-202ENST00000635031 2045 ntBASIC21.58■■□□□ 1.04
UBQLN2Q9UHD9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 AP002365.1-201ENST00000603448 772 ntBASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN2Q9UHD9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN2Q9UHD9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.56■■□□□ 1.04
UBQLN2Q9UHD9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.56■■□□□ 1.04
UBQLN2Q9UHD9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.56■■□□□ 1.04
UBQLN2Q9UHD9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN2Q9UHD9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN2Q9UHD9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN2Q9UHD9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.55■■□□□ 1.04
UBQLN2Q9UHD9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.54■■□□□ 1.04
UBQLN2Q9UHD9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN2Q9UHD9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN2Q9UHD9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
UBQLN2Q9UHD9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN2Q9UHD9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN2Q9UHD9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.51■■□□□ 1.03
UBQLN2Q9UHD9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN2Q9UHD9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN2Q9UHD9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN2Q9UHD9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms