Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CSMD1Q96PZ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.56■■□□□ 1.2
CSMD1Q96PZ7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 AC004987.1-201ENST00000428627 508 ntBASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 U85056.1-201ENST00000616429 682 ntBASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 AL451085.2-201ENST00000605085 799 ntBASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 AC022413.1-201ENST00000624602 984 ntBASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 MIR935-201ENST00000401179 91 ntBASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 ATP5G2P3-201ENST00000429083 425 ntBASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CSMD1Q96PZ7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSMD1Q96PZ7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.46■■□□□ 1.19
CSMD1Q96PZ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CSMD1Q96PZ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.45■■□□□ 1.19
CSMD1Q96PZ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSMD1Q96PZ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CSMD1Q96PZ7 KRT18P60-201ENST00000312876 1297 ntBASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSMD1Q96PZ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.43■■□□□ 1.18
CSMD1Q96PZ7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.41■■□□□ 1.18
CSMD1Q96PZ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSMD1Q96PZ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.38■■□□□ 1.17
CSMD1Q96PZ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSMD1Q96PZ7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSMD1Q96PZ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CSMD1Q96PZ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.31■■□□□ 1.16
CSMD1Q96PZ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.31■■□□□ 1.16
CSMD1Q96PZ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 AC060814.1-201ENST00000554326 538 ntBASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CSMD1Q96PZ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.26■■□□□ 1.15
CSMD1Q96PZ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.26■■□□□ 1.15
CSMD1Q96PZ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSMD1Q96PZ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSMD1Q96PZ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms