Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CPEB3Q8NE35 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPEB3Q8NE35 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CPEB3Q8NE35 AC044849.2-201ENST00000606596 710 ntBASIC22.71■■□□□ 1.23
CPEB3Q8NE35 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CPEB3Q8NE35 AC127502.1-201ENST00000399971 1502 ntBASIC22.68■■□□□ 1.22
CPEB3Q8NE35 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CPEB3Q8NE35 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.67■■□□□ 1.22
CPEB3Q8NE35 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPEB3Q8NE35 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPEB3Q8NE35 AL139393.2-201ENST00000608721 2025 ntBASIC22.65■■□□□ 1.22
CPEB3Q8NE35 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPEB3Q8NE35 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPEB3Q8NE35 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPEB3Q8NE35 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.63■■□□□ 1.21
CPEB3Q8NE35 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.63■■□□□ 1.21
CPEB3Q8NE35 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPEB3Q8NE35 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CPEB3Q8NE35 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPEB3Q8NE35 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPEB3Q8NE35 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
CPEB3Q8NE35 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPEB3Q8NE35 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.58■■□□□ 1.21
CPEB3Q8NE35 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.58■■□□□ 1.2
CPEB3Q8NE35 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPEB3Q8NE35 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.56■■□□□ 1.2
CPEB3Q8NE35 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPEB3Q8NE35 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPEB3Q8NE35 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPEB3Q8NE35 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPEB3Q8NE35 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
CPEB3Q8NE35 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPEB3Q8NE35 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPEB3Q8NE35 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPEB3Q8NE35 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 AC021231.2-201ENST00000594613 730 ntBASIC22.49■■□□□ 1.19
CPEB3Q8NE35 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.49■■□□□ 1.19
CPEB3Q8NE35 AP004833.2-201ENST00000532228 1454 ntBASIC22.48■■□□□ 1.19
CPEB3Q8NE35 DUX4L29-201ENST00000425409 679 ntBASIC22.48■■□□□ 1.19
CPEB3Q8NE35 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPEB3Q8NE35 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPEB3Q8NE35 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPEB3Q8NE35 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.46■■□□□ 1.19
CPEB3Q8NE35 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 LINC00273-201ENST00000539813 1452 ntBASIC22.45■■□□□ 1.18
CPEB3Q8NE35 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPEB3Q8NE35 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPEB3Q8NE35 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 AC135983.2-203ENST00000454486 1613 ntBASIC22.43■■□□□ 1.18
CPEB3Q8NE35 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CPEB3Q8NE35 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.42■■□□□ 1.18
CPEB3Q8NE35 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms