Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMCN2Q8NDA2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMCN2Q8NDA2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMCN2Q8NDA2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMCN2Q8NDA2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMCN2Q8NDA2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMCN2Q8NDA2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMCN2Q8NDA2 THA1P-201ENST00000590384 1145 ntBASIC15.2■□□□□ 0.02
HMCN2Q8NDA2 KRT18P60-201ENST00000312876 1297 ntBASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 AC022413.1-201ENST00000624602 984 ntBASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15.19■□□□□ 0.02
HMCN2Q8NDA2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMCN2Q8NDA2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.17■□□□□ 0.02
HMCN2Q8NDA2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
HMCN2Q8NDA2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMCN2Q8NDA2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMCN2Q8NDA2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMCN2Q8NDA2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.15■□□□□ 0.02
HMCN2Q8NDA2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMCN2Q8NDA2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMCN2Q8NDA2 AC131212.1-201ENST00000613771 668 ntBASIC15.14■□□□□ 0.01
HMCN2Q8NDA2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HMCN2Q8NDA2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HMCN2Q8NDA2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMCN2Q8NDA2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMCN2Q8NDA2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HMCN2Q8NDA2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMCN2Q8NDA2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.12■□□□□ 0.01
HMCN2Q8NDA2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 AC060814.1-201ENST00000554326 538 ntBASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.11■□□□□ 0.01
HMCN2Q8NDA2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMCN2Q8NDA2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.1■□□□□ 0.01
HMCN2Q8NDA2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMCN2Q8NDA2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.1■□□□□ 0.01
HMCN2Q8NDA2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMCN2Q8NDA2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMCN2Q8NDA2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.09■□□□□ 0.01
HMCN2Q8NDA2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.09■□□□□ 0.01
HMCN2Q8NDA2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC15.08■□□□□ 0.01
HMCN2Q8NDA2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMCN2Q8NDA2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMCN2Q8NDA2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HMCN2Q8NDA2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.07■□□□□ 0
HMCN2Q8NDA2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMCN2Q8NDA2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HMCN2Q8NDA2 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.07■□□□□ 0
HMCN2Q8NDA2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.07■□□□□ 0
HMCN2Q8NDA2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMCN2Q8NDA2 AC025884.2-201ENST00000553429 711 ntBASIC15.06■□□□□ 0
HMCN2Q8NDA2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.06■□□□□ 0
HMCN2Q8NDA2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.06■□□□□ 0
HMCN2Q8NDA2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMCN2Q8NDA2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMCN2Q8NDA2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMCN2Q8NDA2 AL356441.2-201ENST00000443009 864 ntBASIC15.06■□□□□ 0
HMCN2Q8NDA2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMCN2Q8NDA2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMCN2Q8NDA2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC15.05■□□□□ 0
HMCN2Q8NDA2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMCN2Q8NDA2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMCN2Q8NDA2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.05■□□□□ -0
HMCN2Q8NDA2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.05■□□□□ -0
HMCN2Q8NDA2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.04■□□□□ -0
HMCN2Q8NDA2 RP9P-202ENST00000450133 1212 ntBASIC15.04■□□□□ -0
HMCN2Q8NDA2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC15.04■□□□□ -0
HMCN2Q8NDA2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMCN2Q8NDA2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMCN2Q8NDA2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMCN2Q8NDA2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
HMCN2Q8NDA2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.03■□□□□ -0
HMCN2Q8NDA2 AC009299.2-201ENST00000482477 511 ntBASIC15.03■□□□□ -0
HMCN2Q8NDA2 AC129492.7-201ENST00000622992 756 ntBASIC15.03■□□□□ -0
HMCN2Q8NDA2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.03■□□□□ -0
HMCN2Q8NDA2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMCN2Q8NDA2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.02■□□□□ -0
HMCN2Q8NDA2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMCN2Q8NDA2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMCN2Q8NDA2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HMCN2Q8NDA2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.01□□□□□ -0.01
HMCN2Q8NDA2 GUSBP5-201ENST00000418136 578 ntBASIC15.01□□□□□ -0.01
HMCN2Q8NDA2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMCN2Q8NDA2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMCN2Q8NDA2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMCN2Q8NDA2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMCN2Q8NDA2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15□□□□□ -0.01
HMCN2Q8NDA2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMCN2Q8NDA2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms