Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NECAP1Q8NC96 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NECAP1Q8NC96 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NECAP1Q8NC96 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.71■□□□□ 0.91
NECAP1Q8NC96 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECAP1Q8NC96 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECAP1Q8NC96 SUZ12P1-203ENST00000578195 985 ntBASIC20.71■□□□□ 0.91
NECAP1Q8NC96 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECAP1Q8NC96 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.7■□□□□ 0.9
NECAP1Q8NC96 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECAP1Q8NC96 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECAP1Q8NC96 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECAP1Q8NC96 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECAP1Q8NC96 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECAP1Q8NC96 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECAP1Q8NC96 AL135925.1-201ENST00000605920 1701 ntBASIC20.69■□□□□ 0.9
NECAP1Q8NC96 AC142086.6-201ENST00000621154 1765 ntBASIC20.68■□□□□ 0.9
NECAP1Q8NC96 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.68■□□□□ 0.9
NECAP1Q8NC96 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NECAP1Q8NC96 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NECAP1Q8NC96 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 ST7-AS1-201ENST00000456775 1889 ntBASIC20.66■□□□□ 0.9
NECAP1Q8NC96 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECAP1Q8NC96 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECAP1Q8NC96 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECAP1Q8NC96 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECAP1Q8NC96 MIR762-201ENST00000390236 83 ntBASIC20.65■□□□□ 0.9
NECAP1Q8NC96 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.65■□□□□ 0.9
NECAP1Q8NC96 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NECAP1Q8NC96 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.64■□□□□ 0.89
NECAP1Q8NC96 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NECAP1Q8NC96 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NECAP1Q8NC96 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NECAP1Q8NC96 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.62■□□□□ 0.89
NECAP1Q8NC96 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NECAP1Q8NC96 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NECAP1Q8NC96 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NECAP1Q8NC96 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NECAP1Q8NC96 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECAP1Q8NC96 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECAP1Q8NC96 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NECAP1Q8NC96 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NECAP1Q8NC96 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECAP1Q8NC96 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.58■□□□□ 0.89
NECAP1Q8NC96 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NECAP1Q8NC96 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
NECAP1Q8NC96 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECAP1Q8NC96 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECAP1Q8NC96 AC005559.1-201ENST00000589661 871 ntBASIC20.56■□□□□ 0.88
NECAP1Q8NC96 AC010864.1-201ENST00000609407 1511 ntBASIC20.56■□□□□ 0.88
NECAP1Q8NC96 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.56■□□□□ 0.88
NECAP1Q8NC96 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECAP1Q8NC96 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.55■□□□□ 0.88
NECAP1Q8NC96 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECAP1Q8NC96 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECAP1Q8NC96 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECAP1Q8NC96 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NECAP1Q8NC96 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NECAP1Q8NC96 AP006261.1-201ENST00000584783 668 ntBASIC20.52■□□□□ 0.88
NECAP1Q8NC96 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.52■□□□□ 0.88
NECAP1Q8NC96 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms