Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf56Q8N813 AC008813.1-201ENST00000536597 885 ntBASIC20.53■□□□□ 0.88
C3orf56Q8N813 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.53■□□□□ 0.88
C3orf56Q8N813 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C3orf56Q8N813 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf56Q8N813 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf56Q8N813 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf56Q8N813 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C3orf56Q8N813 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C3orf56Q8N813 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.49■□□□□ 0.87
C3orf56Q8N813 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.49■□□□□ 0.87
C3orf56Q8N813 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C3orf56Q8N813 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C3orf56Q8N813 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C3orf56Q8N813 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C3orf56Q8N813 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C3orf56Q8N813 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
C3orf56Q8N813 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
C3orf56Q8N813 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.45■□□□□ 0.86
C3orf56Q8N813 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C3orf56Q8N813 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C3orf56Q8N813 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C3orf56Q8N813 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.44■□□□□ 0.86
C3orf56Q8N813 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
C3orf56Q8N813 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C3orf56Q8N813 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C3orf56Q8N813 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C3orf56Q8N813 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.42■□□□□ 0.86
C3orf56Q8N813 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
C3orf56Q8N813 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.41■□□□□ 0.86
C3orf56Q8N813 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.41■□□□□ 0.86
C3orf56Q8N813 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C3orf56Q8N813 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C3orf56Q8N813 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.41■□□□□ 0.86
C3orf56Q8N813 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
C3orf56Q8N813 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C3orf56Q8N813 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C3orf56Q8N813 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
C3orf56Q8N813 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.4■□□□□ 0.86
C3orf56Q8N813 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C3orf56Q8N813 LINC00273-201ENST00000539813 1452 ntBASIC20.39■□□□□ 0.85
C3orf56Q8N813 TSPY13P-201ENST00000338964 914 ntBASIC20.39■□□□□ 0.85
C3orf56Q8N813 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C3orf56Q8N813 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.38■□□□□ 0.85
C3orf56Q8N813 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.38■□□□□ 0.85
C3orf56Q8N813 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C3orf56Q8N813 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.38■□□□□ 0.85
C3orf56Q8N813 U85056.1-201ENST00000616429 682 ntBASIC20.38■□□□□ 0.85
C3orf56Q8N813 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
C3orf56Q8N813 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.37■□□□□ 0.85
C3orf56Q8N813 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C3orf56Q8N813 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C3orf56Q8N813 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
C3orf56Q8N813 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
C3orf56Q8N813 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C3orf56Q8N813 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
C3orf56Q8N813 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C3orf56Q8N813 RARRES2P1-201ENST00000474487 481 ntBASIC20.33■□□□□ 0.85
C3orf56Q8N813 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
C3orf56Q8N813 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.32■□□□□ 0.84
C3orf56Q8N813 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C3orf56Q8N813 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.32■□□□□ 0.84
C3orf56Q8N813 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C3orf56Q8N813 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
C3orf56Q8N813 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.31■□□□□ 0.84
C3orf56Q8N813 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.31■□□□□ 0.84
C3orf56Q8N813 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C3orf56Q8N813 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.31■□□□□ 0.84
C3orf56Q8N813 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
C3orf56Q8N813 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C3orf56Q8N813 ATP5G2P3-201ENST00000429083 425 ntBASIC20.3■□□□□ 0.84
C3orf56Q8N813 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.3■□□□□ 0.84
C3orf56Q8N813 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
C3orf56Q8N813 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C3orf56Q8N813 AC004987.1-201ENST00000428627 508 ntBASIC20.29■□□□□ 0.84
C3orf56Q8N813 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
C3orf56Q8N813 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.28■□□□□ 0.84
C3orf56Q8N813 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.28■□□□□ 0.84
C3orf56Q8N813 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C3orf56Q8N813 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
C3orf56Q8N813 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.27■□□□□ 0.84
C3orf56Q8N813 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C3orf56Q8N813 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.27■□□□□ 0.84
C3orf56Q8N813 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C3orf56Q8N813 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
C3orf56Q8N813 KRT18P60-201ENST00000312876 1297 ntBASIC20.25■□□□□ 0.83
C3orf56Q8N813 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C3orf56Q8N813 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C3orf56Q8N813 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.25■□□□□ 0.83
C3orf56Q8N813 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C3orf56Q8N813 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C3orf56Q8N813 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.24■□□□□ 0.83
C3orf56Q8N813 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C3orf56Q8N813 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
C3orf56Q8N813 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
C3orf56Q8N813 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
C3orf56Q8N813 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.23■□□□□ 0.83
C3orf56Q8N813 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C3orf56Q8N813 AC060814.1-201ENST00000554326 538 ntBASIC20.22■□□□□ 0.83
C3orf56Q8N813 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms