Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CCT4P50991 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCT4P50991 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCT4P50991 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCT4P50991 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCT4P50991 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.98■■■□□ 2.87
CCT4P50991 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.97■■■□□ 2.87
CCT4P50991 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CCT4P50991 AC127502.1-201ENST00000399971 1502 ntBASIC32.97■■■□□ 2.87
CCT4P50991 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.96■■■□□ 2.87
CCT4P50991 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CCT4P50991 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.96■■■□□ 2.87
CCT4P50991 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.95■■■□□ 2.87
CCT4P50991 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CCT4P50991 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
CCT4P50991 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CCT4P50991 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
CCT4P50991 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CCT4P50991 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.93■■■□□ 2.86
CCT4P50991 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
CCT4P50991 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CCT4P50991 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.93■■■□□ 2.86
CCT4P50991 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CCT4P50991 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
CCT4P50991 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CCT4P50991 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
CCT4P50991 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CCT4P50991 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CCT4P50991 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CCT4P50991 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CCT4P50991 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CCT4P50991 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
CCT4P50991 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
CCT4P50991 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
CCT4P50991 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CCT4P50991 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
CCT4P50991 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.86■■■□□ 2.85
CCT4P50991 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
CCT4P50991 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
CCT4P50991 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CCT4P50991 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CCT4P50991 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CCT4P50991 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CCT4P50991 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CCT4P50991 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
CCT4P50991 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CCT4P50991 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CCT4P50991 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.81■■■□□ 2.84
CCT4P50991 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CCT4P50991 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CCT4P50991 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CCT4P50991 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CCT4P50991 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CCT4P50991 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.8■■■□□ 2.84
CCT4P50991 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.8■■■□□ 2.84
CCT4P50991 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.79■■■□□ 2.84
CCT4P50991 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCT4P50991 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
CCT4P50991 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.76■■■□□ 2.84
CCT4P50991 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.84
CCT4P50991 LINC00273-201ENST00000539813 1452 ntBASIC32.75■■■□□ 2.83
CCT4P50991 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCT4P50991 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
CCT4P50991 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.75■■■□□ 2.83
CCT4P50991 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCT4P50991 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCT4P50991 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
CCT4P50991 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CCT4P50991 AL139393.2-201ENST00000608721 2025 ntBASIC32.74■■■□□ 2.83
CCT4P50991 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.74■■■□□ 2.83
CCT4P50991 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.74■■■□□ 2.83
CCT4P50991 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCT4P50991 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.73■■■□□ 2.83
CCT4P50991 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.72■■■□□ 2.83
CCT4P50991 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CCT4P50991 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CCT4P50991 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.71■■■□□ 2.83
CCT4P50991 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CCT4P50991 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCT4P50991 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.69■■■□□ 2.82
CCT4P50991 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.69■■■□□ 2.82
CCT4P50991 AP004833.2-201ENST00000532228 1454 ntBASIC32.68■■■□□ 2.82
CCT4P50991 ABCB10P3-201ENST00000561950 2166 ntBASIC32.68■■■□□ 2.82
CCT4P50991 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CCT4P50991 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CCT4P50991 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCT4P50991 MIR639-201ENST00000384974 98 ntBASIC32.65■■■□□ 2.82
CCT4P50991 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.65■■■□□ 2.82
CCT4P50991 AC135983.2-203ENST00000454486 1613 ntBASIC32.65■■■□□ 2.82
CCT4P50991 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.65■■■□□ 2.82
CCT4P50991 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCT4P50991 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.64■■■□□ 2.82
CCT4P50991 MIR3648-2-201ENST00000581792 180 ntBASIC32.64■■■□□ 2.82
CCT4P50991 MIR3648-1-201ENST00000615959 180 ntBASIC32.64■■■□□ 2.82
CCT4P50991 LINC01971-201ENST00000617888 1048 ntBASIC32.64■■■□□ 2.82
CCT4P50991 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCT4P50991 MIR4449-201ENST00000578365 66 ntBASIC32.63■■■□□ 2.81
CCT4P50991 DUX4L11-201ENST00000611504 1267 ntBASIC32.63■■■□□ 2.81
CCT4P50991 DUX4L12-201ENST00000614593 1267 ntBASIC32.63■■■□□ 2.81
CCT4P50991 DUX4L14-201ENST00000621227 1267 ntBASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms