Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.94■□□□□ 0.78
NDUFA4O00483 AC127502.1-201ENST00000399971 1502 ntBASIC19.94■□□□□ 0.78
NDUFA4O00483 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFA4O00483 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFA4O00483 AC087741.3-201ENST00000624270 1347 ntBASIC19.93■□□□□ 0.78
NDUFA4O00483 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NDUFA4O00483 AC139426.1-201ENST00000568218 2529 ntBASIC19.93■□□□□ 0.78
NDUFA4O00483 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFA4O00483 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFA4O00483 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFA4O00483 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFA4O00483 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFA4O00483 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NDUFA4O00483 AC044849.2-201ENST00000606596 710 ntBASIC19.91■□□□□ 0.78
NDUFA4O00483 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDUFA4O00483 AP004833.2-201ENST00000532228 1454 ntBASIC19.91■□□□□ 0.78
NDUFA4O00483 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFA4O00483 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFA4O00483 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NDUFA4O00483 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFA4O00483 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDUFA4O00483 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDUFA4O00483 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDUFA4O00483 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.89■□□□□ 0.77
NDUFA4O00483 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.89■□□□□ 0.77
NDUFA4O00483 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NDUFA4O00483 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDUFA4O00483 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.88■□□□□ 0.77
NDUFA4O00483 MIR6090-201ENST00000622481 60 ntBASIC19.88■□□□□ 0.77
NDUFA4O00483 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NDUFA4O00483 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.86■□□□□ 0.77
NDUFA4O00483 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.86■□□□□ 0.77
NDUFA4O00483 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
NDUFA4O00483 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NDUFA4O00483 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDUFA4O00483 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDUFA4O00483 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDUFA4O00483 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
NDUFA4O00483 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDUFA4O00483 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.84■□□□□ 0.77
NDUFA4O00483 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NDUFA4O00483 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NDUFA4O00483 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDUFA4O00483 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.83■□□□□ 0.77
NDUFA4O00483 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.83■□□□□ 0.77
NDUFA4O00483 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA4O00483 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.83■□□□□ 0.76
NDUFA4O00483 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NDUFA4O00483 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA4O00483 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.82■□□□□ 0.76
NDUFA4O00483 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFA4O00483 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFA4O00483 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFA4O00483 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFA4O00483 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFA4O00483 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFA4O00483 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFA4O00483 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFA4O00483 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NDUFA4O00483 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.8■□□□□ 0.76
NDUFA4O00483 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFA4O00483 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NDUFA4O00483 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFA4O00483 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA4O00483 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA4O00483 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA4O00483 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA4O00483 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.77■□□□□ 0.76
NDUFA4O00483 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.77■□□□□ 0.76
NDUFA4O00483 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFA4O00483 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFA4O00483 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFA4O00483 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.76■□□□□ 0.75
NDUFA4O00483 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFA4O00483 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFA4O00483 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDUFA4O00483 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDUFA4O00483 LINC00273-201ENST00000539813 1452 ntBASIC19.75■□□□□ 0.75
NDUFA4O00483 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDUFA4O00483 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.75■□□□□ 0.75
NDUFA4O00483 RPS2P35-201ENST00000443417 897 ntBASIC19.75■□□□□ 0.75
NDUFA4O00483 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NDUFA4O00483 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.75■□□□□ 0.75
NDUFA4O00483 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.74■□□□□ 0.75
NDUFA4O00483 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.74■□□□□ 0.75
NDUFA4O00483 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFA4O00483 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.74■□□□□ 0.75
NDUFA4O00483 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFA4O00483 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFA4O00483 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFA4O00483 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NDUFA4O00483 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NDUFA4O00483 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFA4O00483 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFA4O00483 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFA4O00483 AC135983.2-203ENST00000454486 1613 ntBASIC19.71■□□□□ 0.75
NDUFA4O00483 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFA4O00483 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFA4O00483 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFA4O00483 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms