Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM223BA6NKX1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FAM223BA6NKX1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FAM223BA6NKX1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM223BA6NKX1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM223BA6NKX1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM223BA6NKX1 RPS2P35-201ENST00000443417 897 ntBASIC20.2■□□□□ 0.82
FAM223BA6NKX1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 AL139393.2-201ENST00000608721 2025 ntBASIC20.19■□□□□ 0.82
FAM223BA6NKX1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM223BA6NKX1 AP004833.2-201ENST00000532228 1454 ntBASIC20.18■□□□□ 0.82
FAM223BA6NKX1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FAM223BA6NKX1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.18■□□□□ 0.82
FAM223BA6NKX1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM223BA6NKX1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM223BA6NKX1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM223BA6NKX1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM223BA6NKX1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM223BA6NKX1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.14■□□□□ 0.81
FAM223BA6NKX1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.13■□□□□ 0.81
FAM223BA6NKX1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
FAM223BA6NKX1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM223BA6NKX1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM223BA6NKX1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM223BA6NKX1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM223BA6NKX1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM223BA6NKX1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FAM223BA6NKX1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM223BA6NKX1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM223BA6NKX1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 DUX4L29-201ENST00000425409 679 ntBASIC20.09■□□□□ 0.81
FAM223BA6NKX1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM223BA6NKX1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FAM223BA6NKX1 LINC00273-201ENST00000539813 1452 ntBASIC20.08■□□□□ 0.81
FAM223BA6NKX1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
FAM223BA6NKX1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.08■□□□□ 0.81
FAM223BA6NKX1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM223BA6NKX1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FAM223BA6NKX1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM223BA6NKX1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM223BA6NKX1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM223BA6NKX1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM223BA6NKX1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM223BA6NKX1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM223BA6NKX1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FAM223BA6NKX1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
FAM223BA6NKX1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.05■□□□□ 0.8
FAM223BA6NKX1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 AC139426.1-201ENST00000568218 2529 ntBASIC20.04■□□□□ 0.8
FAM223BA6NKX1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM223BA6NKX1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM223BA6NKX1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FAM223BA6NKX1 AC021231.2-201ENST00000594613 730 ntBASIC20.03■□□□□ 0.8
FAM223BA6NKX1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.03■□□□□ 0.8
FAM223BA6NKX1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM223BA6NKX1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM223BA6NKX1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM223BA6NKX1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM223BA6NKX1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FAM223BA6NKX1 AC135983.2-203ENST00000454486 1613 ntBASIC20.02■□□□□ 0.79
FAM223BA6NKX1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
FAM223BA6NKX1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FAM223BA6NKX1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.01■□□□□ 0.79
FAM223BA6NKX1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
FAM223BA6NKX1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.01■□□□□ 0.79
FAM223BA6NKX1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FAM223BA6NKX1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM223BA6NKX1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM223BA6NKX1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM223BA6NKX1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FAM223BA6NKX1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM223BA6NKX1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20■□□□□ 0.79
FAM223BA6NKX1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FAM223BA6NKX1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms