Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.478e-7■□□□□ 11.1
EWSR1Q01844 COMT-210ENST00000467943 546 ntTSL 217.75■□□□□ 0.438e-7■□□□□ 11.1
EWSR1Q01844 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.378e-7■□□□□ 11.1
EWSR1Q01844 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.072e-9■□□□□ 11.1
EWSR1Q01844 RPL36-208ENST00000590786 907 ntTSL 214.58□□□□□ -0.085e-7■□□□□ 11.1
EWSR1Q01844 AMDHD2-205ENST00000563145 859 ntTSL 214.45□□□□□ -0.12e-9■□□□□ 11.1
EWSR1Q01844 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.315e-7■□□□□ 11.1
EWSR1Q01844 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.425e-7■□□□□ 11.1
EWSR1Q01844 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.595e-7■□□□□ 11.1
EWSR1Q01844 AMDHD2-206ENST00000563444 529 ntTSL 210.62□□□□□ -0.712e-9■□□□□ 11.1
EWSR1Q01844 DGCR2-207ENST00000608548 518 ntTSL 29.25□□□□□ -0.938e-7■□□□□ 11.1
EWSR1Q01844 DGCR2-204ENST00000473832 606 ntTSL 58.15□□□□□ -1.18e-7■□□□□ 11.1
EWSR1Q01844 RPL36-204ENST00000579446 452 ntTSL 2 BASIC8.12□□□□□ -1.115e-7■□□□□ 11.1
EWSR1Q01844 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.225e-7■□□□□ 11.1
EWSR1Q01844 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.41■□□□□ 0.222e-7■□□□□ 11.1
EWSR1Q01844 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.16□□□□□ -0.143e-6■□□□□ 11.1
EWSR1Q01844 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-6■□□□□ 11.1
EWSR1Q01844 KDELR2-205ENST00000463747 376 ntTSL 57.97□□□□□ -1.133e-6■□□□□ 11.1
EWSR1Q01844 KDELR2-202ENST00000382267 583 ntTSL 47.72□□□□□ -1.173e-6■□□□□ 11.1
EWSR1Q01844 KDELR2-204ENST00000462052 382 ntTSL 25.9□□□□□ -1.463e-6■□□□□ 11.1
EWSR1Q01844 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.66□□□□□ -1.663e-6■□□□□ 11.1
EWSR1Q01844 SMPD4P1-201ENST00000416717 2263 ntBASIC8.76□□□□□ -1.017e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.063e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.943e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.913e-7■□□□□ 11.1
EWSR1Q01844 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.74■□□□□ 0.433e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-209ENST00000527368 812 ntTSL 517.3■□□□□ 0.363e-7■□□□□ 11.1
EWSR1Q01844 HUWE1-205ENST00000446750 872 ntTSL 516.51■□□□□ 0.233e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.123e-7■□□□□ 11.1
EWSR1Q01844 HUWE1-201ENST00000218328 5488 ntTSL 515.67■□□□□ 0.13e-7■□□□□ 11.1
EWSR1Q01844 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.038e-14■□□□□ 11.1
EWSR1Q01844 CLK3-225ENST00000569063 833 ntTSL 514.86□□□□□ -0.033e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-202ENST00000524551 548 ntAPPRIS ALT2 TSL 514.69□□□□□ -0.063e-7■□□□□ 11.1
EWSR1Q01844 LINC01311-201ENST00000565162 1445 ntBASIC14.18□□□□□ -0.143e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-217ENST00000534325 583 ntAPPRIS ALT2 TSL 313.94□□□□□ -0.183e-7■□□□□ 11.1
EWSR1Q01844 CLK3-221ENST00000568139 918 ntTSL 513.13□□□□□ -0.313e-7■□□□□ 11.1
EWSR1Q01844 CLK3-217ENST00000566126 732 ntTSL 512.66□□□□□ -0.383e-7■□□□□ 11.1
EWSR1Q01844 CLK3-223ENST00000568488 481 ntTSL 312.21□□□□□ -0.453e-7■□□□□ 11.1
EWSR1Q01844 CLK3-211ENST00000563297 526 ntTSL 411.68□□□□□ -0.543e-7■□□□□ 11.1
EWSR1Q01844 CLK3-204ENST00000483723 1749 ntTSL 211.46□□□□□ -0.573e-7■□□□□ 11.1
EWSR1Q01844 CLK3-203ENST00000454830 3787 ntTSL 511.43□□□□□ -0.583e-7■□□□□ 11.1
EWSR1Q01844 POLD2-209ENST00000461116 420 ntTSL 211.23□□□□□ -0.613e-7■□□□□ 11.1
EWSR1Q01844 CLK3-209ENST00000562670 544 ntTSL 411.11□□□□□ -0.633e-7■□□□□ 11.1
EWSR1Q01844 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.633e-7■□□□□ 11.1
EWSR1Q01844 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.683e-7■□□□□ 11.1
EWSR1Q01844 CLK3-214ENST00000564096 805 ntTSL 210.14□□□□□ -0.793e-7■□□□□ 11.1
EWSR1Q01844 PFKFB4-211ENST00000471890 553 ntTSL 410.12□□□□□ -0.794e-9■□□□□ 11.1
EWSR1Q01844 TFRC-204ENST00000421258 524 ntTSL 39.77□□□□□ -0.858e-14■□□□□ 11.1
EWSR1Q01844 CLK3-224ENST00000568605 1047 ntTSL 29.63□□□□□ -0.873e-7■□□□□ 11.1
EWSR1Q01844 CLK3-226ENST00000569406 3591 ntTSL 29.27□□□□□ -0.933e-7■□□□□ 11.1
EWSR1Q01844 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.933e-7■□□□□ 11.1
EWSR1Q01844 C11orf80-211ENST00000531400 367 ntTSL 38.98□□□□□ -0.973e-7■□□□□ 11.1
EWSR1Q01844 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.093e-7■□□□□ 11.1
EWSR1Q01844 PFKFB4-214ENST00000490404 849 ntTSL 38.08□□□□□ -1.124e-9■□□□□ 11.1
EWSR1Q01844 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.128e-14■□□□□ 11.1
EWSR1Q01844 TFRC-208ENST00000464011 546 ntTSL 47.95□□□□□ -1.148e-14■□□□□ 11.1
EWSR1Q01844 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.433e-7■□□□□ 11.1
EWSR1Q01844 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.458e-14■□□□□ 11.1
EWSR1Q01844 ZNF217-203ENST00000431687 779 ntTSL 55.88□□□□□ -1.473e-7■□□□□ 11.1
EWSR1Q01844 PFKFB4-210ENST00000468162 576 ntTSL 55.27□□□□□ -1.574e-9■□□□□ 11.1
EWSR1Q01844 ZNF217-205ENST00000540425 568 ntTSL 35.27□□□□□ -1.573e-7■□□□□ 11.1
EWSR1Q01844 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC7.79□□□□□ -1.162e-8■□□□□ 11.1
EWSR1Q01844 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC7.79□□□□□ -1.162e-8■□□□□ 11.1
EWSR1Q01844 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.795e-6■□□□□ 11
EWSR1Q01844 KLHDC4-223ENST00000568499 445 ntTSL 311.42□□□□□ -0.585e-6■□□□□ 11
EWSR1Q01844 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.89e-7■□□□□ 11
EWSR1Q01844 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.36■□□□□ 0.219e-7■□□□□ 11
EWSR1Q01844 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.19e-7■□□□□ 11
EWSR1Q01844 MBD3-210ENST00000592361 907 ntTSL 512.51□□□□□ -0.412e-7■□□□□ 11
EWSR1Q01844 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.786e-7■□□□□ 11
EWSR1Q01844 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.616e-7■□□□□ 11
EWSR1Q01844 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.52□□□□□ -1.693e-6■□□□□ 10.9
EWSR1Q01844 AC102953.2-201ENST00000609755 3026 ntBASIC11.64□□□□□ -0.553e-7■□□□□ 10.9
EWSR1Q01844 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.4□□□□□ -1.875e-44■□□□□ 10.8
EWSR1Q01844 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.445e-10■□□□□ 10.8
EWSR1Q01844 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.455e-10■□□□□ 10.8
EWSR1Q01844 FDPS-205ENST00000465559 677 ntTSL 311.56□□□□□ -0.565e-10■□□□□ 10.8
EWSR1Q01844 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.595e-10■□□□□ 10.8
EWSR1Q01844 FDPS-210ENST00000474345 713 ntTSL 311.37□□□□□ -0.595e-10■□□□□ 10.8
EWSR1Q01844 FDPS-213ENST00000489003 976 ntTSL 211.37□□□□□ -0.595e-10■□□□□ 10.8
EWSR1Q01844 FDPS-208ENST00000470171 746 ntTSL 211.2□□□□□ -0.625e-10■□□□□ 10.8
EWSR1Q01844 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.665e-10■□□□□ 10.8
EWSR1Q01844 FDPS-207ENST00000468479 938 ntTSL 210.9□□□□□ -0.665e-10■□□□□ 10.8
EWSR1Q01844 FDPS-216ENST00000491013 912 ntTSL 510.71□□□□□ -0.695e-10■□□□□ 10.8
EWSR1Q01844 FDPS-219ENST00000495308 808 ntTSL 210.13□□□□□ -0.795e-10■□□□□ 10.8
EWSR1Q01844 FDPS-204ENST00000461507 1022 ntTSL 29.4□□□□□ -0.95e-10■□□□□ 10.8
EWSR1Q01844 FDPS-211ENST00000477057 741 ntTSL 29.4□□□□□ -0.95e-10■□□□□ 10.8
EWSR1Q01844 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC9.33□□□□□ -0.925e-10■□□□□ 10.8
EWSR1Q01844 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC9.01□□□□□ -0.975e-10■□□□□ 10.8
EWSR1Q01844 FDPS-209ENST00000471117 630 ntTSL 36.76□□□□□ -1.335e-10■□□□□ 10.8
EWSR1Q01844 MFSD2B-204ENST00000469562 2613 ntTSL 1 (best)13.28□□□□□ -0.285e-10■□□□□ 10.8
EWSR1Q01844 GATD1-204ENST00000465313 446 ntTSL 311.85□□□□□ -0.515e-10■□□□□ 10.8
EWSR1Q01844 GATD1-215ENST00000533960 299 ntTSL 29.69□□□□□ -0.865e-10■□□□□ 10.8
EWSR1Q01844 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.644e-15■□□□□ 10.8
EWSR1Q01844 CTTN-206ENST00000482755 1087 ntTSL 214.52□□□□□ -0.093e-6■□□□□ 10.8
EWSR1Q01844 CTTN-211ENST00000527622 597 ntTSL 413.95□□□□□ -0.183e-6■□□□□ 10.8
EWSR1Q01844 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC7.63□□□□□ -1.193e-7■□□□□ 10.8
EWSR1Q01844 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC6.34□□□□□ -1.393e-7■□□□□ 10.8
EWSR1Q01844 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.81□□□□□ -1.483e-7■□□□□ 10.8
EWSR1Q01844 AMD1-205ENST00000451850 3121 ntTSL 1 (best)5.39□□□□□ -1.553e-7■□□□□ 10.8
Retrieved 100 of 7,101 protein–RNA pairs in 355 ms