RNA–Protein interactions for RNA: ENST00000533960.1

GATD1-215, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 2

Gene GATD1, Length 299 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-215ENST00000533960 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
GATD1-215ENST00000533960 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
GATD1-215ENST00000533960 ABCC9O60706 1549 aa24.63■■□□□ 1.53
GATD1-215ENST00000533960 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
GATD1-215ENST00000533960 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
GATD1-215ENST00000533960 MYO15BQ96JP2 1530 aa24.19■■□□□ 1.46
GATD1-215ENST00000533960 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
GATD1-215ENST00000533960 NACADO15069 1562 aa24.1■■□□□ 1.45
GATD1-215ENST00000533960 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
GATD1-215ENST00000533960 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
GATD1-215ENST00000533960 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
GATD1-215ENST00000533960 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
GATD1-215ENST00000533960 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
GATD1-215ENST00000533960 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
GATD1-215ENST00000533960 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
GATD1-215ENST00000533960 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
GATD1-215ENST00000533960 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
GATD1-215ENST00000533960 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
GATD1-215ENST00000533960 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
GATD1-215ENST00000533960 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
GATD1-215ENST00000533960 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
GATD1-215ENST00000533960 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
GATD1-215ENST00000533960 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
GATD1-215ENST00000533960 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
GATD1-215ENST00000533960 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
GATD1-215ENST00000533960 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
GATD1-215ENST00000533960 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
GATD1-215ENST00000533960 WIZO95785 1651 aa22.18■■□□□ 1.14
GATD1-215ENST00000533960 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
GATD1-215ENST00000533960 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
GATD1-215ENST00000533960 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
GATD1-215ENST00000533960 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
GATD1-215ENST00000533960 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.06
GATD1-215ENST00000533960 CFTRP13569 1480 aa21.6■■□□□ 1.05
GATD1-215ENST00000533960 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
GATD1-215ENST00000533960 NESP48681 1621 aa21.44■■□□□ 1.02
GATD1-215ENST00000533960 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
GATD1-215ENST00000533960 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
GATD1-215ENST00000533960 PRDM2Q13029 1718 aa21.31■■□□□ 1
GATD1-215ENST00000533960 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
GATD1-215ENST00000533960 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
GATD1-215ENST00000533960 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
GATD1-215ENST00000533960 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
GATD1-215ENST00000533960 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
GATD1-215ENST00000533960 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
GATD1-215ENST00000533960 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
GATD1-215ENST00000533960 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
GATD1-215ENST00000533960 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
GATD1-215ENST00000533960 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
GATD1-215ENST00000533960 CUX1P39880 1505 aa21.04■□□□□ 0.96
GATD1-215ENST00000533960 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
GATD1-215ENST00000533960 WDR62O43379 1518 aa21.02■□□□□ 0.96
GATD1-215ENST00000533960 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
GATD1-215ENST00000533960 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
GATD1-215ENST00000533960 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
GATD1-215ENST00000533960 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
GATD1-215ENST00000533960 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
GATD1-215ENST00000533960 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
GATD1-215ENST00000533960 CUX2O14529 1486 aa20.87■□□□□ 0.93
GATD1-215ENST00000533960 SOGA1O94964 1423 aa20.87■□□□□ 0.93
GATD1-215ENST00000533960 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
GATD1-215ENST00000533960 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
GATD1-215ENST00000533960 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
GATD1-215ENST00000533960 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
GATD1-215ENST00000533960 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
GATD1-215ENST00000533960 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
GATD1-215ENST00000533960 EEA1Q15075 1411 aa20.67■□□□□ 0.9
GATD1-215ENST00000533960 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
GATD1-215ENST00000533960 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
GATD1-215ENST00000533960 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
GATD1-215ENST00000533960 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■■■■ 32.4
GATD1-215ENST00000533960 IGF1RP08069 1367 aa20.58■□□□□ 0.88
GATD1-215ENST00000533960 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
GATD1-215ENST00000533960 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
GATD1-215ENST00000533960 RUSC2Q8N2Y8 1516 aa20.56■□□□□ 0.88
GATD1-215ENST00000533960 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
GATD1-215ENST00000533960 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
GATD1-215ENST00000533960 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
GATD1-215ENST00000533960 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
GATD1-215ENST00000533960 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
GATD1-215ENST00000533960 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
GATD1-215ENST00000533960 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
GATD1-215ENST00000533960 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
GATD1-215ENST00000533960 PBRM1Q86U86 1689 aa20.39■□□□□ 0.86
GATD1-215ENST00000533960 CUL7Q14999 1698 aa20.38■□□□□ 0.85
GATD1-215ENST00000533960 SNAPC4Q5SXM2 1469 aa20.38■□□□□ 0.85
GATD1-215ENST00000533960 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
GATD1-215ENST00000533960 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
GATD1-215ENST00000533960 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
GATD1-215ENST00000533960 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
GATD1-215ENST00000533960 KIF21BO75037 1637 aa20.31■□□□□ 0.84
GATD1-215ENST00000533960 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
GATD1-215ENST00000533960 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
GATD1-215ENST00000533960 FBLN2P98095 1184 aa20.26■□□□□ 0.83
GATD1-215ENST00000533960 UBTFP17480 764 aaKnown RBP20.2■□□□□ 0.82
GATD1-215ENST00000533960 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
GATD1-215ENST00000533960 NUP160Q12769 1436 aa20.18■□□□□ 0.82
GATD1-215ENST00000533960 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
GATD1-215ENST00000533960 TNIKQ9UKE5 1360 aa20.16■□□□□ 0.82
GATD1-215ENST00000533960 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms