RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
TFRC-204ENST00000421258 ABCC9O60706 1549 aa30.63■■■□□ 2.49
TFRC-204ENST00000421258 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
TFRC-204ENST00000421258 DNAJC5BQ9UF47 199 aa29.25■■■□□ 2.27
TFRC-204ENST00000421258 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
TFRC-204ENST00000421258 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
TFRC-204ENST00000421258 NACADO15069 1562 aa28.42■■■□□ 2.14
TFRC-204ENST00000421258 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
TFRC-204ENST00000421258 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
TFRC-204ENST00000421258 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
TFRC-204ENST00000421258 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
TFRC-204ENST00000421258 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
TFRC-204ENST00000421258 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
TFRC-204ENST00000421258 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
TFRC-204ENST00000421258 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
TFRC-204ENST00000421258 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
TFRC-204ENST00000421258 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
TFRC-204ENST00000421258 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
TFRC-204ENST00000421258 DNAJC5Q9H3Z4 198 aa27.12■■□□□ 1.93
TFRC-204ENST00000421258 CUX2O14529 1486 aa26.49■■□□□ 1.83
TFRC-204ENST00000421258 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
TFRC-204ENST00000421258 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
TFRC-204ENST00000421258 NESP48681 1621 aa26.18■■□□□ 1.78
TFRC-204ENST00000421258 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
TFRC-204ENST00000421258 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
TFRC-204ENST00000421258 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
TFRC-204ENST00000421258 SMARCA2P51531 1590 aa26■■□□□ 1.75
TFRC-204ENST00000421258 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
TFRC-204ENST00000421258 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
TFRC-204ENST00000421258 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
TFRC-204ENST00000421258 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
TFRC-204ENST00000421258 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
TFRC-204ENST00000421258 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
TFRC-204ENST00000421258 PEG3Q9GZU2 1588 aa25.71■■□□□ 1.71
TFRC-204ENST00000421258 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
TFRC-204ENST00000421258 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
TFRC-204ENST00000421258 MRC2Q9UBG0 1479 aa25.49■■□□□ 1.67
TFRC-204ENST00000421258 WDR62O43379 1518 aa25.46■■□□□ 1.67
TFRC-204ENST00000421258 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
TFRC-204ENST00000421258 WIZO95785 1651 aa25.29■■□□□ 1.64
TFRC-204ENST00000421258 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
TFRC-204ENST00000421258 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
TFRC-204ENST00000421258 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
TFRC-204ENST00000421258 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
TFRC-204ENST00000421258 CFTRP13569 1480 aa25.07■■□□□ 1.6
TFRC-204ENST00000421258 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
TFRC-204ENST00000421258 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
TFRC-204ENST00000421258 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
TFRC-204ENST00000421258 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
TFRC-204ENST00000421258 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
TFRC-204ENST00000421258 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
TFRC-204ENST00000421258 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
TFRC-204ENST00000421258 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
TFRC-204ENST00000421258 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
TFRC-204ENST00000421258 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
TFRC-204ENST00000421258 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
TFRC-204ENST00000421258 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
TFRC-204ENST00000421258 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
TFRC-204ENST00000421258 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
TFRC-204ENST00000421258 CHD1O14646 1710 aa24.61■■□□□ 1.53
TFRC-204ENST00000421258 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
TFRC-204ENST00000421258 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.524e-8■■■■■ 29.3
TFRC-204ENST00000421258 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
TFRC-204ENST00000421258 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
TFRC-204ENST00000421258 FBLN2P98095 1184 aa24.49■■□□□ 1.51
TFRC-204ENST00000421258 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
TFRC-204ENST00000421258 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
TFRC-204ENST00000421258 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
TFRC-204ENST00000421258 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
TFRC-204ENST00000421258 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
TFRC-204ENST00000421258 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
TFRC-204ENST00000421258 SOGA1O94964 1423 aa24.24■■□□□ 1.47
TFRC-204ENST00000421258 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
TFRC-204ENST00000421258 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
TFRC-204ENST00000421258 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
TFRC-204ENST00000421258 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
TFRC-204ENST00000421258 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
TFRC-204ENST00000421258 CUX1P39880 1505 aa24.1■■□□□ 1.45
TFRC-204ENST00000421258 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
TFRC-204ENST00000421258 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
TFRC-204ENST00000421258 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
TFRC-204ENST00000421258 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
TFRC-204ENST00000421258 PBRM1Q86U86 1689 aa24■■□□□ 1.43
TFRC-204ENST00000421258 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
TFRC-204ENST00000421258 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.42
TFRC-204ENST00000421258 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
TFRC-204ENST00000421258 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
TFRC-204ENST00000421258 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
TFRC-204ENST00000421258 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
TFRC-204ENST00000421258 NUP160Q12769 1436 aa23.74■■□□□ 1.39
TFRC-204ENST00000421258 KIF13AQ9H1H9 1805 aa23.72■■□□□ 1.39
TFRC-204ENST00000421258 SHROOM2Q13796 1616 aa23.7■■□□□ 1.39
TFRC-204ENST00000421258 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
TFRC-204ENST00000421258 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
TFRC-204ENST00000421258 PRG4Q92954 1404 aaPredicted RBP23.57■■□□□ 1.36
TFRC-204ENST00000421258 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
TFRC-204ENST00000421258 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
TFRC-204ENST00000421258 FAM69CQ0P6D2 419 aa23.49■■□□□ 1.35
TFRC-204ENST00000421258 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
TFRC-204ENST00000421258 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms