RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
FDPS-205ENST00000465559 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
FDPS-205ENST00000465559 ABCC9O60706 1549 aa32.53■■■□□ 2.8
FDPS-205ENST00000465559 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
FDPS-205ENST00000465559 NACADO15069 1562 aa31.44■■■□□ 2.62
FDPS-205ENST00000465559 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
FDPS-205ENST00000465559 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
FDPS-205ENST00000465559 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
FDPS-205ENST00000465559 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
FDPS-205ENST00000465559 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
FDPS-205ENST00000465559 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
FDPS-205ENST00000465559 SCRIBQ14160 1630 aa30.5■■■□□ 2.47
FDPS-205ENST00000465559 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
FDPS-205ENST00000465559 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
FDPS-205ENST00000465559 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
FDPS-205ENST00000465559 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
FDPS-205ENST00000465559 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
FDPS-205ENST00000465559 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
FDPS-205ENST00000465559 SMARCA4P51532 1647 aa29.25■■■□□ 2.27
FDPS-205ENST00000465559 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
FDPS-205ENST00000465559 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
FDPS-205ENST00000465559 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
FDPS-205ENST00000465559 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
FDPS-205ENST00000465559 PEG3Q9GZU2 1588 aa29.02■■■□□ 2.24
FDPS-205ENST00000465559 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
FDPS-205ENST00000465559 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
FDPS-205ENST00000465559 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
FDPS-205ENST00000465559 WIZO95785 1651 aa28.77■■■□□ 2.2
FDPS-205ENST00000465559 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.19
FDPS-205ENST00000465559 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
FDPS-205ENST00000465559 NESP48681 1621 aa28.24■■■□□ 2.11
FDPS-205ENST00000465559 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
FDPS-205ENST00000465559 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
FDPS-205ENST00000465559 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
FDPS-205ENST00000465559 CFTRP13569 1480 aa28.05■■■□□ 2.08
FDPS-205ENST00000465559 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
FDPS-205ENST00000465559 ERCC6Q03468 1493 aa27.98■■■□□ 2.07
FDPS-205ENST00000465559 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
FDPS-205ENST00000465559 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
FDPS-205ENST00000465559 PRDM2Q13029 1718 aa27.89■■■□□ 2.05
FDPS-205ENST00000465559 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
FDPS-205ENST00000465559 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
FDPS-205ENST00000465559 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
FDPS-205ENST00000465559 CUX2O14529 1486 aa27.73■■■□□ 2.03
FDPS-205ENST00000465559 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
FDPS-205ENST00000465559 WDR62O43379 1518 aa27.64■■■□□ 2.02
FDPS-205ENST00000465559 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
FDPS-205ENST00000465559 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
FDPS-205ENST00000465559 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
FDPS-205ENST00000465559 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.97
FDPS-205ENST00000465559 CUX1P39880 1505 aa27.26■■□□□ 1.96
FDPS-205ENST00000465559 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
FDPS-205ENST00000465559 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
FDPS-205ENST00000465559 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
FDPS-205ENST00000465559 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
FDPS-205ENST00000465559 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
FDPS-205ENST00000465559 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
FDPS-205ENST00000465559 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
FDPS-205ENST00000465559 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
FDPS-205ENST00000465559 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
FDPS-205ENST00000465559 RAD54L2Q9Y4B4 1467 aa27.04■■□□□ 1.92
FDPS-205ENST00000465559 SOGA1O94964 1423 aa27.03■■□□□ 1.92
FDPS-205ENST00000465559 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
FDPS-205ENST00000465559 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
FDPS-205ENST00000465559 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
FDPS-205ENST00000465559 AQRO60306 1485 aaKnown RBP eCLIP26.89■■□□□ 1.93e-9■■■■□ 26.7
FDPS-205ENST00000465559 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
FDPS-205ENST00000465559 ABCA5Q8WWZ7 1642 aa26.79■■□□□ 1.88
FDPS-205ENST00000465559 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
FDPS-205ENST00000465559 GRIN2BQ13224 1484 aa26.72■■□□□ 1.87
FDPS-205ENST00000465559 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
FDPS-205ENST00000465559 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
FDPS-205ENST00000465559 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
FDPS-205ENST00000465559 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
FDPS-205ENST00000465559 CHD1O14646 1710 aa26.61■■□□□ 1.85
FDPS-205ENST00000465559 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
FDPS-205ENST00000465559 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
FDPS-205ENST00000465559 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
FDPS-205ENST00000465559 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
FDPS-205ENST00000465559 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
FDPS-205ENST00000465559 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
FDPS-205ENST00000465559 FHAD1B1AJZ9 1412 aa26.44■■□□□ 1.82
FDPS-205ENST00000465559 IGF1RP08069 1367 aa26.44■■□□□ 1.82
FDPS-205ENST00000465559 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
FDPS-205ENST00000465559 FBLN2P98095 1184 aa26.42■■□□□ 1.82
FDPS-205ENST00000465559 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
FDPS-205ENST00000465559 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
FDPS-205ENST00000465559 CUL7Q14999 1698 aa26.35■■□□□ 1.81
FDPS-205ENST00000465559 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
FDPS-205ENST00000465559 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
FDPS-205ENST00000465559 NUP160Q12769 1436 aa26.31■■□□□ 1.8
FDPS-205ENST00000465559 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
FDPS-205ENST00000465559 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
FDPS-205ENST00000465559 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
FDPS-205ENST00000465559 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
FDPS-205ENST00000465559 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
FDPS-205ENST00000465559 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
FDPS-205ENST00000465559 EEA1Q15075 1411 aa26.13■■□□□ 1.77
FDPS-205ENST00000465559 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
FDPS-205ENST00000465559 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms