RNA–Protein interactions for RNA: ENST00000464011.1

TFRC-208, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-208ENST00000464011 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
TFRC-208ENST00000464011 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
TFRC-208ENST00000464011 ABCC9O60706 1549 aa26.23■■□□□ 1.79
TFRC-208ENST00000464011 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
TFRC-208ENST00000464011 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
TFRC-208ENST00000464011 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
TFRC-208ENST00000464011 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
TFRC-208ENST00000464011 NACADO15069 1562 aa24.21■■□□□ 1.47
TFRC-208ENST00000464011 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
TFRC-208ENST00000464011 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
TFRC-208ENST00000464011 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
TFRC-208ENST00000464011 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.43
TFRC-208ENST00000464011 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
TFRC-208ENST00000464011 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
TFRC-208ENST00000464011 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
TFRC-208ENST00000464011 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
TFRC-208ENST00000464011 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
TFRC-208ENST00000464011 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
TFRC-208ENST00000464011 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
TFRC-208ENST00000464011 CUX2O14529 1486 aa23.12■■□□□ 1.29
TFRC-208ENST00000464011 SCRIBQ14160 1630 aa23■■□□□ 1.27
TFRC-208ENST00000464011 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
TFRC-208ENST00000464011 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
TFRC-208ENST00000464011 ZCCHC6Q5VYS8 1495 aaKnown RBP22.81■■□□□ 1.24
TFRC-208ENST00000464011 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TFRC-208ENST00000464011 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
TFRC-208ENST00000464011 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
TFRC-208ENST00000464011 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
TFRC-208ENST00000464011 NESP48681 1621 aa22.26■■□□□ 1.15
TFRC-208ENST00000464011 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
TFRC-208ENST00000464011 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
TFRC-208ENST00000464011 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
TFRC-208ENST00000464011 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
TFRC-208ENST00000464011 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
TFRC-208ENST00000464011 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
TFRC-208ENST00000464011 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
TFRC-208ENST00000464011 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
TFRC-208ENST00000464011 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.09
TFRC-208ENST00000464011 WDR62O43379 1518 aa21.8■■□□□ 1.08
TFRC-208ENST00000464011 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
TFRC-208ENST00000464011 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
TFRC-208ENST00000464011 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
TFRC-208ENST00000464011 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
TFRC-208ENST00000464011 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
TFRC-208ENST00000464011 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
TFRC-208ENST00000464011 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
TFRC-208ENST00000464011 FOXD1Q16676 465 aa21.54■■□□□ 1.04
TFRC-208ENST00000464011 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
TFRC-208ENST00000464011 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
TFRC-208ENST00000464011 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
TFRC-208ENST00000464011 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
TFRC-208ENST00000464011 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
TFRC-208ENST00000464011 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
TFRC-208ENST00000464011 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
TFRC-208ENST00000464011 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
TFRC-208ENST00000464011 CFTRP13569 1480 aa21.15■□□□□ 0.98
TFRC-208ENST00000464011 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
TFRC-208ENST00000464011 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
TFRC-208ENST00000464011 IFT140Q96RY7 1462 aa21.08■□□□□ 0.97
TFRC-208ENST00000464011 CHD1O14646 1710 aa21.07■□□□□ 0.96
TFRC-208ENST00000464011 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
TFRC-208ENST00000464011 WIZO95785 1651 aa21.02■□□□□ 0.96
TFRC-208ENST00000464011 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
TFRC-208ENST00000464011 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
TFRC-208ENST00000464011 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
TFRC-208ENST00000464011 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
TFRC-208ENST00000464011 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
TFRC-208ENST00000464011 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-14■■■■■ 35.3
TFRC-208ENST00000464011 ILDR1Q86SU0 546 aaPredicted RBP20.74■□□□□ 0.91
TFRC-208ENST00000464011 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
TFRC-208ENST00000464011 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
TFRC-208ENST00000464011 FBLN2P98095 1184 aa20.71■□□□□ 0.91
TFRC-208ENST00000464011 DNMBPQ6XZF7 1577 aa20.71■□□□□ 0.91
TFRC-208ENST00000464011 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
TFRC-208ENST00000464011 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
TFRC-208ENST00000464011 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.89
TFRC-208ENST00000464011 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
TFRC-208ENST00000464011 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
TFRC-208ENST00000464011 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
TFRC-208ENST00000464011 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
TFRC-208ENST00000464011 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
TFRC-208ENST00000464011 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
TFRC-208ENST00000464011 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
TFRC-208ENST00000464011 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
TFRC-208ENST00000464011 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
TFRC-208ENST00000464011 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
TFRC-208ENST00000464011 SOGA1O94964 1423 aa20.37■□□□□ 0.85
TFRC-208ENST00000464011 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
TFRC-208ENST00000464011 KDM4FA0A1W2PPD8 638 aa20.34■□□□□ 0.85
TFRC-208ENST00000464011 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
TFRC-208ENST00000464011 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
TFRC-208ENST00000464011 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
TFRC-208ENST00000464011 ADRA2BP18089 450 aa20.26■□□□□ 0.83
TFRC-208ENST00000464011 CEP170Q5SW79 1584 aa20.24■□□□□ 0.83
TFRC-208ENST00000464011 KDM6BO15054 1643 aa20.21■□□□□ 0.83
TFRC-208ENST00000464011 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
TFRC-208ENST00000464011 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
TFRC-208ENST00000464011 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
TFRC-208ENST00000464011 DIP2BQ9P265 1576 aa20.15■□□□□ 0.82
TFRC-208ENST00000464011 MSH5O43196 834 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms