RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
FDPS-210ENST00000474345 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
FDPS-210ENST00000474345 ABCC9O60706 1549 aa31.41■■■□□ 2.62
FDPS-210ENST00000474345 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
FDPS-210ENST00000474345 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
FDPS-210ENST00000474345 NACADO15069 1562 aa30.27■■■□□ 2.44
FDPS-210ENST00000474345 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
FDPS-210ENST00000474345 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
FDPS-210ENST00000474345 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
FDPS-210ENST00000474345 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
FDPS-210ENST00000474345 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
FDPS-210ENST00000474345 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
FDPS-210ENST00000474345 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
FDPS-210ENST00000474345 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
FDPS-210ENST00000474345 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
FDPS-210ENST00000474345 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
FDPS-210ENST00000474345 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
FDPS-210ENST00000474345 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
FDPS-210ENST00000474345 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
FDPS-210ENST00000474345 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
FDPS-210ENST00000474345 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
FDPS-210ENST00000474345 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
FDPS-210ENST00000474345 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
FDPS-210ENST00000474345 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
FDPS-210ENST00000474345 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
FDPS-210ENST00000474345 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
FDPS-210ENST00000474345 WIZO95785 1651 aa27.78■■■□□ 2.04
FDPS-210ENST00000474345 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
FDPS-210ENST00000474345 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
FDPS-210ENST00000474345 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
FDPS-210ENST00000474345 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
FDPS-210ENST00000474345 NESP48681 1621 aa27.25■■□□□ 1.95
FDPS-210ENST00000474345 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
FDPS-210ENST00000474345 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
FDPS-210ENST00000474345 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
FDPS-210ENST00000474345 CFTRP13569 1480 aa27.03■■□□□ 1.92
FDPS-210ENST00000474345 ERCC6Q03468 1493 aa27■■□□□ 1.91
FDPS-210ENST00000474345 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
FDPS-210ENST00000474345 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
FDPS-210ENST00000474345 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
FDPS-210ENST00000474345 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
FDPS-210ENST00000474345 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
FDPS-210ENST00000474345 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
FDPS-210ENST00000474345 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
FDPS-210ENST00000474345 CUX2O14529 1486 aa26.63■■□□□ 1.85
FDPS-210ENST00000474345 WDR62O43379 1518 aa26.57■■□□□ 1.84
FDPS-210ENST00000474345 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
FDPS-210ENST00000474345 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
FDPS-210ENST00000474345 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
FDPS-210ENST00000474345 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
FDPS-210ENST00000474345 CUX1P39880 1505 aa26.31■■□□□ 1.8
FDPS-210ENST00000474345 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
FDPS-210ENST00000474345 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
FDPS-210ENST00000474345 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
FDPS-210ENST00000474345 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
FDPS-210ENST00000474345 SOGA1O94964 1423 aa26.16■■□□□ 1.78
FDPS-210ENST00000474345 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
FDPS-210ENST00000474345 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
FDPS-210ENST00000474345 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
FDPS-210ENST00000474345 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
FDPS-210ENST00000474345 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
FDPS-210ENST00000474345 ZNF608Q9ULD9 1512 aaPredicted RBP26.11■■□□□ 1.77
FDPS-210ENST00000474345 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.752e-9■■■■□ 26.7
FDPS-210ENST00000474345 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
FDPS-210ENST00000474345 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
FDPS-210ENST00000474345 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
FDPS-210ENST00000474345 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
FDPS-210ENST00000474345 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
FDPS-210ENST00000474345 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
FDPS-210ENST00000474345 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
FDPS-210ENST00000474345 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
FDPS-210ENST00000474345 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
FDPS-210ENST00000474345 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
FDPS-210ENST00000474345 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
FDPS-210ENST00000474345 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
FDPS-210ENST00000474345 FBLN2P98095 1184 aa25.68■■□□□ 1.7
FDPS-210ENST00000474345 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
FDPS-210ENST00000474345 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
FDPS-210ENST00000474345 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
FDPS-210ENST00000474345 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
FDPS-210ENST00000474345 CHD1O14646 1710 aa25.61■■□□□ 1.69
FDPS-210ENST00000474345 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
FDPS-210ENST00000474345 IGF1RP08069 1367 aa25.59■■□□□ 1.69
FDPS-210ENST00000474345 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
FDPS-210ENST00000474345 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
FDPS-210ENST00000474345 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
FDPS-210ENST00000474345 ADAMTS12P58397 1594 aa25.51■■□□□ 1.67
FDPS-210ENST00000474345 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
FDPS-210ENST00000474345 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
FDPS-210ENST00000474345 CUL7Q14999 1698 aa25.39■■□□□ 1.65
FDPS-210ENST00000474345 NUP160Q12769 1436 aa25.33■■□□□ 1.65
FDPS-210ENST00000474345 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.65
FDPS-210ENST00000474345 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
FDPS-210ENST00000474345 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
FDPS-210ENST00000474345 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
FDPS-210ENST00000474345 EEA1Q15075 1411 aa25.27■■□□□ 1.64
FDPS-210ENST00000474345 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
FDPS-210ENST00000474345 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
FDPS-210ENST00000474345 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
FDPS-210ENST00000474345 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms