Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 DUX4L23-201ENST00000615195 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L24-201ENST00000617576 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L22-201ENST00000618238 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L20-201ENST00000619712 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L21-201ENST00000622058 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L10-201ENST00000622460 1267 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 DUX4L25-201ENST00000624915 1269 ntBASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
CDC42BPBQ9Y5S2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC40.85■■■■■ 4.13
CDC42BPBQ9Y5S2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC40.85■■■■■ 4.13
CDC42BPBQ9Y5S2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
CDC42BPBQ9Y5S2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC40.84■■■■■ 4.13
CDC42BPBQ9Y5S2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC40.84■■■■■ 4.13
CDC42BPBQ9Y5S2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
CDC42BPBQ9Y5S2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
CDC42BPBQ9Y5S2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC40.82■■■■■ 4.13
CDC42BPBQ9Y5S2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC40.82■■■■■ 4.12
CDC42BPBQ9Y5S2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 ABHD17AP3-201ENST00000503096 1137 ntBASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC40.81■■■■■ 4.12
CDC42BPBQ9Y5S2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC40.8■■■■■ 4.12
CDC42BPBQ9Y5S2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC40.8■■■■■ 4.12
CDC42BPBQ9Y5S2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
CDC42BPBQ9Y5S2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC40.78■■■■■ 4.12
CDC42BPBQ9Y5S2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
CDC42BPBQ9Y5S2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
CDC42BPBQ9Y5S2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
CDC42BPBQ9Y5S2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.73■■■■■ 4.11
CDC42BPBQ9Y5S2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC40.72■■■■■ 4.11
CDC42BPBQ9Y5S2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
CDC42BPBQ9Y5S2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC40.71■■■■■ 4.11
CDC42BPBQ9Y5S2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC40.7■■■■■ 4.11
CDC42BPBQ9Y5S2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
CDC42BPBQ9Y5S2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC40.68■■■■■ 4.1
CDC42BPBQ9Y5S2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC40.67■■■■■ 4.1
CDC42BPBQ9Y5S2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC40.67■■■■■ 4.1
CDC42BPBQ9Y5S2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC40.67■■■■■ 4.1
CDC42BPBQ9Y5S2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC40.66■■■■■ 4.1
CDC42BPBQ9Y5S2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC40.66■■■■■ 4.1
CDC42BPBQ9Y5S2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
CDC42BPBQ9Y5S2 CHML-204ENST00000638121 920 ntTSL 2 BASIC40.64■■■■■ 4.1
CDC42BPBQ9Y5S2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC40.64■■■■■ 4.1
CDC42BPBQ9Y5S2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
CDC42BPBQ9Y5S2 HES6-205ENST00000409356 528 ntTSL 2 BASIC40.63■■■■■ 4.09
CDC42BPBQ9Y5S2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.63■■■■■ 4.09
CDC42BPBQ9Y5S2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC40.62■■■■■ 4.09
CDC42BPBQ9Y5S2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC40.62■■■■■ 4.09
CDC42BPBQ9Y5S2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
CDC42BPBQ9Y5S2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
CDC42BPBQ9Y5S2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
CDC42BPBQ9Y5S2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC40.61■■■■■ 4.09
CDC42BPBQ9Y5S2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC40.59■■■■■ 4.09
CDC42BPBQ9Y5S2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC40.57■■■■■ 4.09
CDC42BPBQ9Y5S2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
CDC42BPBQ9Y5S2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
CDC42BPBQ9Y5S2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
CDC42BPBQ9Y5S2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.55■■■■■ 4.08
CDC42BPBQ9Y5S2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC40.54■■■■■ 4.08
CDC42BPBQ9Y5S2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC40.52■■■■■ 4.08
CDC42BPBQ9Y5S2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
CDC42BPBQ9Y5S2 LINC00273-201ENST00000539813 1452 ntBASIC40.51■■■■■ 4.08
CDC42BPBQ9Y5S2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
CDC42BPBQ9Y5S2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC40.5■■■■■ 4.07
CDC42BPBQ9Y5S2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
CDC42BPBQ9Y5S2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC40.5■■■■■ 4.07
CDC42BPBQ9Y5S2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC40.48■■■■■ 4.07
CDC42BPBQ9Y5S2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
CDC42BPBQ9Y5S2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 RARRES2P2-201ENST00000394842 485 ntBASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC40.45■■■■■ 4.07
CDC42BPBQ9Y5S2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
CDC42BPBQ9Y5S2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
CDC42BPBQ9Y5S2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC40.42■■■■■ 4.06
CDC42BPBQ9Y5S2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
CDC42BPBQ9Y5S2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
CDC42BPBQ9Y5S2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
CDC42BPBQ9Y5S2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC40.39■■■■■ 4.06
CDC42BPBQ9Y5S2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC40.38■■■■■ 4.06
CDC42BPBQ9Y5S2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
CDC42BPBQ9Y5S2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
CDC42BPBQ9Y5S2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC40.36■■■■■ 4.05
CDC42BPBQ9Y5S2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC40.36■■■■■ 4.05
CDC42BPBQ9Y5S2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC40.35■■■■■ 4.05
CDC42BPBQ9Y5S2 ABHD17AP5-201ENST00000580133 923 ntBASIC40.35■■■■■ 4.05
CDC42BPBQ9Y5S2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
CDC42BPBQ9Y5S2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC40.34■■■■■ 4.05
CDC42BPBQ9Y5S2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC40.33■■■■■ 4.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms