Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A6AQ9H2W1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A6AQ9H2W1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A6AQ9H2W1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A6AQ9H2W1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A6AQ9H2W1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MS4A6AQ9H2W1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.98■□□□□ 0.79
MS4A6AQ9H2W1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MS4A6AQ9H2W1 AL135925.1-201ENST00000605920 1701 ntBASIC19.97■□□□□ 0.79
MS4A6AQ9H2W1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MS4A6AQ9H2W1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MS4A6AQ9H2W1 MIR762-201ENST00000390236 83 ntBASIC19.95■□□□□ 0.78
MS4A6AQ9H2W1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 ST7-AS1-201ENST00000456775 1889 ntBASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MS4A6AQ9H2W1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A6AQ9H2W1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.93■□□□□ 0.78
MS4A6AQ9H2W1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A6AQ9H2W1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A6AQ9H2W1 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.93■□□□□ 0.78
MS4A6AQ9H2W1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MS4A6AQ9H2W1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A6AQ9H2W1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MS4A6AQ9H2W1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A6AQ9H2W1 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.91■□□□□ 0.78
MS4A6AQ9H2W1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.91■□□□□ 0.78
MS4A6AQ9H2W1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.91■□□□□ 0.78
MS4A6AQ9H2W1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MS4A6AQ9H2W1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.9■□□□□ 0.78
MS4A6AQ9H2W1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MS4A6AQ9H2W1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MS4A6AQ9H2W1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.89■□□□□ 0.77
MS4A6AQ9H2W1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MS4A6AQ9H2W1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A6AQ9H2W1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A6AQ9H2W1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 AC005559.1-201ENST00000589661 871 ntBASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MS4A6AQ9H2W1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 AC010864.1-201ENST00000609407 1511 ntBASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MS4A6AQ9H2W1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MS4A6AQ9H2W1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MS4A6AQ9H2W1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MS4A6AQ9H2W1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.83■□□□□ 0.77
MS4A6AQ9H2W1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MS4A6AQ9H2W1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MS4A6AQ9H2W1 AC135731.1-201ENST00000569415 2548 ntBASIC19.8■□□□□ 0.76
MS4A6AQ9H2W1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MS4A6AQ9H2W1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MS4A6AQ9H2W1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MS4A6AQ9H2W1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MS4A6AQ9H2W1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MS4A6AQ9H2W1 AP006261.1-201ENST00000584783 668 ntBASIC19.79■□□□□ 0.76
MS4A6AQ9H2W1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MS4A6AQ9H2W1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 MIR3665-201ENST00000578708 105 ntBASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
MS4A6AQ9H2W1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 DUX4L28-201ENST00000623687 678 ntBASIC19.77■□□□□ 0.76
MS4A6AQ9H2W1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.77■□□□□ 0.75
MS4A6AQ9H2W1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MS4A6AQ9H2W1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MS4A6AQ9H2W1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms