Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.94■■■■□ 3.18
PCDH11XQ9BZA7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PCDH11XQ9BZA7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
PCDH11XQ9BZA7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L13-201ENST00000554103 1267 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L15-201ENST00000611059 1267 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L23-201ENST00000615195 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L24-201ENST00000617576 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L22-201ENST00000618238 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L20-201ENST00000619712 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L21-201ENST00000622058 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L10-201ENST00000622460 1267 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 DUX4L25-201ENST00000624915 1269 ntBASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.9■■■■□ 3.18
PCDH11XQ9BZA7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
PCDH11XQ9BZA7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
PCDH11XQ9BZA7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
PCDH11XQ9BZA7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PCDH11XQ9BZA7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
PCDH11XQ9BZA7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC34.88■■■■□ 3.17
PCDH11XQ9BZA7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
PCDH11XQ9BZA7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PCDH11XQ9BZA7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
PCDH11XQ9BZA7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PCDH11XQ9BZA7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PCDH11XQ9BZA7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
PCDH11XQ9BZA7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.84■■■■□ 3.17
PCDH11XQ9BZA7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
PCDH11XQ9BZA7 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.83■■■■□ 3.17
PCDH11XQ9BZA7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.83■■■■□ 3.17
PCDH11XQ9BZA7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
PCDH11XQ9BZA7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.83■■■■□ 3.17
PCDH11XQ9BZA7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
PCDH11XQ9BZA7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC34.81■■■■□ 3.16
PCDH11XQ9BZA7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC34.81■■■■□ 3.16
PCDH11XQ9BZA7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
PCDH11XQ9BZA7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
PCDH11XQ9BZA7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
PCDH11XQ9BZA7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC34.78■■■■□ 3.16
PCDH11XQ9BZA7 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.77■■■■□ 3.16
PCDH11XQ9BZA7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.76■■■■□ 3.15
PCDH11XQ9BZA7 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.75■■■■□ 3.15
PCDH11XQ9BZA7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.74■■■■□ 3.15
PCDH11XQ9BZA7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.74■■■■□ 3.15
PCDH11XQ9BZA7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
PCDH11XQ9BZA7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
PCDH11XQ9BZA7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC34.72■■■■□ 3.15
PCDH11XQ9BZA7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC34.71■■■■□ 3.15
PCDH11XQ9BZA7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PCDH11XQ9BZA7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.15
PCDH11XQ9BZA7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC34.69■■■■□ 3.14
PCDH11XQ9BZA7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
PCDH11XQ9BZA7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
PCDH11XQ9BZA7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCDH11XQ9BZA7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
PCDH11XQ9BZA7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.67■■■■□ 3.14
PCDH11XQ9BZA7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
PCDH11XQ9BZA7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
PCDH11XQ9BZA7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
PCDH11XQ9BZA7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.65■■■■□ 3.14
PCDH11XQ9BZA7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.64■■■■□ 3.14
PCDH11XQ9BZA7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.64■■■■□ 3.14
PCDH11XQ9BZA7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.63■■■■□ 3.13
PCDH11XQ9BZA7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PCDH11XQ9BZA7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PCDH11XQ9BZA7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC34.62■■■■□ 3.13
PCDH11XQ9BZA7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.62■■■■□ 3.13
PCDH11XQ9BZA7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
PCDH11XQ9BZA7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.61■■■■□ 3.13
PCDH11XQ9BZA7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC34.6■■■■□ 3.13
PCDH11XQ9BZA7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PCDH11XQ9BZA7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.59■■■■□ 3.13
PCDH11XQ9BZA7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.59■■■■□ 3.13
PCDH11XQ9BZA7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PCDH11XQ9BZA7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.58■■■■□ 3.13
PCDH11XQ9BZA7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCDH11XQ9BZA7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCDH11XQ9BZA7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCDH11XQ9BZA7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC34.58■■■■□ 3.13
PCDH11XQ9BZA7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
PCDH11XQ9BZA7 AL161658.1-201ENST00000623641 1967 ntBASIC34.56■■■■□ 3.12
PCDH11XQ9BZA7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.55■■■■□ 3.12
PCDH11XQ9BZA7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PCDH11XQ9BZA7 LINC00273-201ENST00000539813 1452 ntBASIC34.54■■■■□ 3.12
PCDH11XQ9BZA7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.54■■■■□ 3.12
PCDH11XQ9BZA7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
PCDH11XQ9BZA7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC34.52■■■■□ 3.12
PCDH11XQ9BZA7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.52■■■■□ 3.12
PCDH11XQ9BZA7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
PCDH11XQ9BZA7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
PCDH11XQ9BZA7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC34.5■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms