Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
ALMS1Q8TCU4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.36■□□□□ 0.53
ALMS1Q8TCU4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALMS1Q8TCU4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.36■□□□□ 0.53
ALMS1Q8TCU4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALMS1Q8TCU4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.35■□□□□ 0.53
ALMS1Q8TCU4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALMS1Q8TCU4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.33■□□□□ 0.53
ALMS1Q8TCU4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALMS1Q8TCU4 GPX1-201ENST00000419349 1106 ntBASIC18.32■□□□□ 0.52
ALMS1Q8TCU4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.32■□□□□ 0.52
ALMS1Q8TCU4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALMS1Q8TCU4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALMS1Q8TCU4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ALMS1Q8TCU4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALMS1Q8TCU4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALMS1Q8TCU4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALMS1Q8TCU4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALMS1Q8TCU4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.29■□□□□ 0.52
ALMS1Q8TCU4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALMS1Q8TCU4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ALMS1Q8TCU4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALMS1Q8TCU4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALMS1Q8TCU4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ALMS1Q8TCU4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALMS1Q8TCU4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ALMS1Q8TCU4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ALMS1Q8TCU4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.27■□□□□ 0.51
ALMS1Q8TCU4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.27■□□□□ 0.51
ALMS1Q8TCU4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.26■□□□□ 0.51
ALMS1Q8TCU4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
ALMS1Q8TCU4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALMS1Q8TCU4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALMS1Q8TCU4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALMS1Q8TCU4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ALMS1Q8TCU4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALMS1Q8TCU4 NTF6A-201ENST00000591175 560 ntBASIC18.23■□□□□ 0.51
ALMS1Q8TCU4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ALMS1Q8TCU4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.23■□□□□ 0.51
ALMS1Q8TCU4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALMS1Q8TCU4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALMS1Q8TCU4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALMS1Q8TCU4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ALMS1Q8TCU4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.2■□□□□ 0.5
ALMS1Q8TCU4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
ALMS1Q8TCU4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.19■□□□□ 0.5
ALMS1Q8TCU4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.19■□□□□ 0.5
ALMS1Q8TCU4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ALMS1Q8TCU4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ALMS1Q8TCU4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALMS1Q8TCU4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ALMS1Q8TCU4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ALMS1Q8TCU4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALMS1Q8TCU4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.18■□□□□ 0.5
ALMS1Q8TCU4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ALMS1Q8TCU4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
ALMS1Q8TCU4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ALMS1Q8TCU4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALMS1Q8TCU4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.15■□□□□ 0.5
ALMS1Q8TCU4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ALMS1Q8TCU4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.15■□□□□ 0.5
ALMS1Q8TCU4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.15■□□□□ 0.5
ALMS1Q8TCU4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ALMS1Q8TCU4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALMS1Q8TCU4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ALMS1Q8TCU4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ALMS1Q8TCU4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALMS1Q8TCU4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALMS1Q8TCU4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALMS1Q8TCU4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALMS1Q8TCU4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.11■□□□□ 0.49
ALMS1Q8TCU4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALMS1Q8TCU4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ALMS1Q8TCU4 AC012354.3-201ENST00000623734 483 ntBASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 AL033527.3-201ENST00000566366 1196 ntBASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 LINC00273-201ENST00000539813 1452 ntBASIC18.09■□□□□ 0.49
ALMS1Q8TCU4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALMS1Q8TCU4 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.08■□□□□ 0.49
ALMS1Q8TCU4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.08■□□□□ 0.48
ALMS1Q8TCU4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ALMS1Q8TCU4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.08■□□□□ 0.48
ALMS1Q8TCU4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ALMS1Q8TCU4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALMS1Q8TCU4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.07■□□□□ 0.48
ALMS1Q8TCU4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ALMS1Q8TCU4 AC008813.1-201ENST00000536597 885 ntBASIC18.07■□□□□ 0.48
ALMS1Q8TCU4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ALMS1Q8TCU4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ALMS1Q8TCU4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALMS1Q8TCU4 AC018358.1-201ENST00000631079 1402 ntBASIC18.05■□□□□ 0.48
ALMS1Q8TCU4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALMS1Q8TCU4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms