Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RETREG2Q8NC44 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.8■■■□□ 2.36
RETREG2Q8NC44 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.8■■■□□ 2.36
RETREG2Q8NC44 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RETREG2Q8NC44 AC108673.1-201ENST00000510422 1159 ntBASIC29.8■■■□□ 2.36
RETREG2Q8NC44 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RETREG2Q8NC44 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RETREG2Q8NC44 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.79■■■□□ 2.36
RETREG2Q8NC44 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RETREG2Q8NC44 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RETREG2Q8NC44 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RETREG2Q8NC44 MIR4449-201ENST00000578365 66 ntBASIC29.77■■■□□ 2.36
RETREG2Q8NC44 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.77■■■□□ 2.36
RETREG2Q8NC44 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
RETREG2Q8NC44 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RETREG2Q8NC44 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.76■■■□□ 2.35
RETREG2Q8NC44 MIR639-201ENST00000384974 98 ntBASIC29.75■■■□□ 2.35
RETREG2Q8NC44 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.75■■■□□ 2.35
RETREG2Q8NC44 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RETREG2Q8NC44 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RETREG2Q8NC44 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.73■■■□□ 2.35
RETREG2Q8NC44 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.72■■■□□ 2.35
RETREG2Q8NC44 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.71■■■□□ 2.35
RETREG2Q8NC44 MIR6090-201ENST00000622481 60 ntBASIC29.7■■■□□ 2.35
RETREG2Q8NC44 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.34
RETREG2Q8NC44 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
RETREG2Q8NC44 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
RETREG2Q8NC44 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RETREG2Q8NC44 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.69■■■□□ 2.34
RETREG2Q8NC44 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.69■■■□□ 2.34
RETREG2Q8NC44 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RETREG2Q8NC44 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RETREG2Q8NC44 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RETREG2Q8NC44 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RETREG2Q8NC44 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RETREG2Q8NC44 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.67■■■□□ 2.34
RETREG2Q8NC44 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RETREG2Q8NC44 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.66■■■□□ 2.34
RETREG2Q8NC44 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RETREG2Q8NC44 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RETREG2Q8NC44 ABCB10P1-201ENST00000614297 2181 ntBASIC29.66■■■□□ 2.34
RETREG2Q8NC44 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.65■■■□□ 2.34
RETREG2Q8NC44 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RETREG2Q8NC44 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.64■■■□□ 2.34
RETREG2Q8NC44 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.64■■■□□ 2.34
RETREG2Q8NC44 MIR3648-2-201ENST00000581792 180 ntBASIC29.64■■■□□ 2.34
RETREG2Q8NC44 MIR3648-1-201ENST00000615959 180 ntBASIC29.64■■■□□ 2.34
RETREG2Q8NC44 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
RETREG2Q8NC44 AC016575.1-201ENST00000607026 382 ntBASIC29.63■■■□□ 2.33
RETREG2Q8NC44 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.63■■■□□ 2.33
RETREG2Q8NC44 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RETREG2Q8NC44 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RETREG2Q8NC44 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RETREG2Q8NC44 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RETREG2Q8NC44 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RETREG2Q8NC44 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.61■■■□□ 2.33
RETREG2Q8NC44 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.61■■■□□ 2.33
RETREG2Q8NC44 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RETREG2Q8NC44 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RETREG2Q8NC44 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
RETREG2Q8NC44 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
RETREG2Q8NC44 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.59■■■□□ 2.33
RETREG2Q8NC44 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.59■■■□□ 2.33
RETREG2Q8NC44 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.57■■■□□ 2.32
RETREG2Q8NC44 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.57■■■□□ 2.32
RETREG2Q8NC44 DUX4L11-201ENST00000611504 1267 ntBASIC29.57■■■□□ 2.32
RETREG2Q8NC44 DUX4L12-201ENST00000614593 1267 ntBASIC29.57■■■□□ 2.32
RETREG2Q8NC44 LINC01971-201ENST00000617888 1048 ntBASIC29.57■■■□□ 2.32
RETREG2Q8NC44 DUX4L14-201ENST00000621227 1267 ntBASIC29.57■■■□□ 2.32
RETREG2Q8NC44 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RETREG2Q8NC44 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RETREG2Q8NC44 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RETREG2Q8NC44 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
RETREG2Q8NC44 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RETREG2Q8NC44 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RETREG2Q8NC44 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
RETREG2Q8NC44 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RETREG2Q8NC44 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RETREG2Q8NC44 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.51■■■□□ 2.31
RETREG2Q8NC44 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RETREG2Q8NC44 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RETREG2Q8NC44 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RETREG2Q8NC44 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RETREG2Q8NC44 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RETREG2Q8NC44 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.48■■■□□ 2.31
RETREG2Q8NC44 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.48■■■□□ 2.31
RETREG2Q8NC44 CR559946.2-201ENST00000623684 991 ntBASIC29.47■■■□□ 2.31
RETREG2Q8NC44 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.47■■■□□ 2.31
RETREG2Q8NC44 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RETREG2Q8NC44 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.46■■■□□ 2.31
RETREG2Q8NC44 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RETREG2Q8NC44 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RETREG2Q8NC44 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
RETREG2Q8NC44 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
RETREG2Q8NC44 AL161658.1-201ENST00000623641 1967 ntBASIC29.45■■■□□ 2.31
RETREG2Q8NC44 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
RETREG2Q8NC44 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
RETREG2Q8NC44 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RETREG2Q8NC44 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
RETREG2Q8NC44 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms