Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
LRRC56Q8IYG6 AL162393.1-201ENST00000437852 946 ntBASIC25.51■■□□□ 1.67
LRRC56Q8IYG6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC56Q8IYG6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LRRC56Q8IYG6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LRRC56Q8IYG6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LRRC56Q8IYG6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC56Q8IYG6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.49■■□□□ 1.67
LRRC56Q8IYG6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC56Q8IYG6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC56Q8IYG6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.48■■□□□ 1.67
LRRC56Q8IYG6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.48■■□□□ 1.67
LRRC56Q8IYG6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC56Q8IYG6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.47■■□□□ 1.67
LRRC56Q8IYG6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC56Q8IYG6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC56Q8IYG6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.46■■□□□ 1.67
LRRC56Q8IYG6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.45■■□□□ 1.66
LRRC56Q8IYG6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
LRRC56Q8IYG6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC56Q8IYG6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
LRRC56Q8IYG6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
LRRC56Q8IYG6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC56Q8IYG6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC56Q8IYG6 AC087741.3-201ENST00000624270 1347 ntBASIC25.42■■□□□ 1.66
LRRC56Q8IYG6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.42■■□□□ 1.66
LRRC56Q8IYG6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC56Q8IYG6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC56Q8IYG6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC56Q8IYG6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC56Q8IYG6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRC56Q8IYG6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRC56Q8IYG6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRC56Q8IYG6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRC56Q8IYG6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
LRRC56Q8IYG6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.38■■□□□ 1.65
LRRC56Q8IYG6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRC56Q8IYG6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.37■■□□□ 1.65
LRRC56Q8IYG6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC56Q8IYG6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC56Q8IYG6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC56Q8IYG6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC56Q8IYG6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
LRRC56Q8IYG6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LRRC56Q8IYG6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
LRRC56Q8IYG6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRC56Q8IYG6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.35■■□□□ 1.65
LRRC56Q8IYG6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRC56Q8IYG6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRC56Q8IYG6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRC56Q8IYG6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRC56Q8IYG6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRC56Q8IYG6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRC56Q8IYG6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRC56Q8IYG6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
LRRC56Q8IYG6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRC56Q8IYG6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LRRC56Q8IYG6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LRRC56Q8IYG6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
LRRC56Q8IYG6 RPS2P35-201ENST00000443417 897 ntBASIC25.32■■□□□ 1.64
LRRC56Q8IYG6 MIR6090-201ENST00000622481 60 ntBASIC25.32■■□□□ 1.64
LRRC56Q8IYG6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
LRRC56Q8IYG6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC56Q8IYG6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC56Q8IYG6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC56Q8IYG6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC56Q8IYG6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.3■■□□□ 1.64
LRRC56Q8IYG6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC56Q8IYG6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 AC108673.1-201ENST00000510422 1159 ntBASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.29■■□□□ 1.64
LRRC56Q8IYG6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LRRC56Q8IYG6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC56Q8IYG6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC56Q8IYG6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC56Q8IYG6 ABCB10P3-201ENST00000561950 2166 ntBASIC25.27■■□□□ 1.64
LRRC56Q8IYG6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LRRC56Q8IYG6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
LRRC56Q8IYG6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
LRRC56Q8IYG6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRC56Q8IYG6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
LRRC56Q8IYG6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC56Q8IYG6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
LRRC56Q8IYG6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.25■■□□□ 1.63
LRRC56Q8IYG6 AC044849.2-201ENST00000606596 710 ntBASIC25.25■■□□□ 1.63
LRRC56Q8IYG6 AC127502.1-201ENST00000399971 1502 ntBASIC25.24■■□□□ 1.63
LRRC56Q8IYG6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC56Q8IYG6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
LRRC56Q8IYG6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC56Q8IYG6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC56Q8IYG6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
LRRC56Q8IYG6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC56Q8IYG6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.21■■□□□ 1.63
LRRC56Q8IYG6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms