Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CCDC146Q8IYE0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CCDC146Q8IYE0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
CCDC146Q8IYE0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35■■■■□ 3.19
CCDC146Q8IYE0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35■■■■□ 3.19
CCDC146Q8IYE0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC35■■■■□ 3.19
CCDC146Q8IYE0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CCDC146Q8IYE0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CCDC146Q8IYE0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CCDC146Q8IYE0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CCDC146Q8IYE0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CCDC146Q8IYE0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
CCDC146Q8IYE0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC34.97■■■■□ 3.19
CCDC146Q8IYE0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
CCDC146Q8IYE0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CCDC146Q8IYE0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CCDC146Q8IYE0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CCDC146Q8IYE0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC34.96■■■■□ 3.19
CCDC146Q8IYE0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC34.96■■■■□ 3.19
CCDC146Q8IYE0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.96■■■■□ 3.19
CCDC146Q8IYE0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CCDC146Q8IYE0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CCDC146Q8IYE0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC34.94■■■■□ 3.18
CCDC146Q8IYE0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
CCDC146Q8IYE0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CCDC146Q8IYE0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CCDC146Q8IYE0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC34.91■■■■□ 3.18
CCDC146Q8IYE0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
CCDC146Q8IYE0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
CCDC146Q8IYE0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC34.9■■■■□ 3.18
CCDC146Q8IYE0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC34.89■■■■□ 3.18
CCDC146Q8IYE0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC34.88■■■■□ 3.17
CCDC146Q8IYE0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CCDC146Q8IYE0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.88■■■■□ 3.17
CCDC146Q8IYE0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CCDC146Q8IYE0 MIR6090-201ENST00000622481 60 ntBASIC34.88■■■■□ 3.17
CCDC146Q8IYE0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CCDC146Q8IYE0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CCDC146Q8IYE0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CCDC146Q8IYE0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CCDC146Q8IYE0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CCDC146Q8IYE0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.84■■■■□ 3.17
CCDC146Q8IYE0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC146Q8IYE0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
CCDC146Q8IYE0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
CCDC146Q8IYE0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC34.82■■■■□ 3.16
CCDC146Q8IYE0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CCDC146Q8IYE0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CCDC146Q8IYE0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CCDC146Q8IYE0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CCDC146Q8IYE0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CCDC146Q8IYE0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CCDC146Q8IYE0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CCDC146Q8IYE0 AC044849.2-201ENST00000606596 710 ntBASIC34.79■■■■□ 3.16
CCDC146Q8IYE0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC34.79■■■■□ 3.16
CCDC146Q8IYE0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CCDC146Q8IYE0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CCDC146Q8IYE0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
CCDC146Q8IYE0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CCDC146Q8IYE0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC34.77■■■■□ 3.16
CCDC146Q8IYE0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC34.77■■■■□ 3.16
CCDC146Q8IYE0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CCDC146Q8IYE0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.76■■■■□ 3.16
CCDC146Q8IYE0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CCDC146Q8IYE0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CCDC146Q8IYE0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CCDC146Q8IYE0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
CCDC146Q8IYE0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
CCDC146Q8IYE0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CCDC146Q8IYE0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC34.72■■■■□ 3.15
CCDC146Q8IYE0 AC108673.1-201ENST00000510422 1159 ntBASIC34.72■■■■□ 3.15
CCDC146Q8IYE0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CCDC146Q8IYE0 AC139426.1-201ENST00000568218 2529 ntBASIC34.71■■■■□ 3.15
CCDC146Q8IYE0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.7■■■■□ 3.15
CCDC146Q8IYE0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC146Q8IYE0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC146Q8IYE0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC146Q8IYE0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
CCDC146Q8IYE0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CCDC146Q8IYE0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
CCDC146Q8IYE0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CCDC146Q8IYE0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
CCDC146Q8IYE0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC34.65■■■■□ 3.14
CCDC146Q8IYE0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.65■■■■□ 3.14
CCDC146Q8IYE0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CCDC146Q8IYE0 AC127502.1-201ENST00000399971 1502 ntBASIC34.65■■■■□ 3.14
CCDC146Q8IYE0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CCDC146Q8IYE0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
CCDC146Q8IYE0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.63■■■■□ 3.13
CCDC146Q8IYE0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CCDC146Q8IYE0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC34.63■■■■□ 3.13
CCDC146Q8IYE0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
CCDC146Q8IYE0 ABCB10P3-201ENST00000561950 2166 ntBASIC34.61■■■■□ 3.13
CCDC146Q8IYE0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CCDC146Q8IYE0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.6■■■■□ 3.13
CCDC146Q8IYE0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC34.6■■■■□ 3.13
CCDC146Q8IYE0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.59■■■■□ 3.13
CCDC146Q8IYE0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CCDC146Q8IYE0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CCDC146Q8IYE0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms