Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC33.05■■■□□ 2.88
SLX4Q8IY92 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SLX4Q8IY92 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33.04■■■□□ 2.88
SLX4Q8IY92 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC33.02■■■□□ 2.88
SLX4Q8IY92 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
SLX4Q8IY92 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33.02■■■□□ 2.88
SLX4Q8IY92 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.88
SLX4Q8IY92 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
SLX4Q8IY92 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
SLX4Q8IY92 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.01■■■□□ 2.87
SLX4Q8IY92 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC33■■■□□ 2.87
SLX4Q8IY92 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.98■■■□□ 2.87
SLX4Q8IY92 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.98■■■□□ 2.87
SLX4Q8IY92 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
SLX4Q8IY92 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.96■■■□□ 2.87
SLX4Q8IY92 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.95■■■□□ 2.87
SLX4Q8IY92 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.93■■■□□ 2.86
SLX4Q8IY92 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SLX4Q8IY92 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.9■■■□□ 2.86
SLX4Q8IY92 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SLX4Q8IY92 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.9■■■□□ 2.86
SLX4Q8IY92 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SLX4Q8IY92 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.88■■■□□ 2.85
SLX4Q8IY92 RARRES2P2-201ENST00000394842 485 ntBASIC32.88■■■□□ 2.85
SLX4Q8IY92 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SLX4Q8IY92 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SLX4Q8IY92 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SLX4Q8IY92 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.87■■■□□ 2.85
SLX4Q8IY92 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
SLX4Q8IY92 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.85■■■□□ 2.85
SLX4Q8IY92 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SLX4Q8IY92 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.83■■■□□ 2.85
SLX4Q8IY92 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
SLX4Q8IY92 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SLX4Q8IY92 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
SLX4Q8IY92 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SLX4Q8IY92 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.82■■■□□ 2.84
SLX4Q8IY92 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SLX4Q8IY92 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
SLX4Q8IY92 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.81■■■□□ 2.84
SLX4Q8IY92 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SLX4Q8IY92 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.81■■■□□ 2.84
SLX4Q8IY92 ABHD17AP5-201ENST00000580133 923 ntBASIC32.81■■■□□ 2.84
SLX4Q8IY92 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.81■■■□□ 2.84
SLX4Q8IY92 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.8■■■□□ 2.84
SLX4Q8IY92 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLX4Q8IY92 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SLX4Q8IY92 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLX4Q8IY92 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
SLX4Q8IY92 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.75■■■□□ 2.83
SLX4Q8IY92 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
SLX4Q8IY92 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.74■■■□□ 2.83
SLX4Q8IY92 GPX1-201ENST00000419349 1106 ntBASIC32.74■■■□□ 2.83
SLX4Q8IY92 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SLX4Q8IY92 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
SLX4Q8IY92 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.72■■■□□ 2.83
SLX4Q8IY92 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SLX4Q8IY92 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
SLX4Q8IY92 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SLX4Q8IY92 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SLX4Q8IY92 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SLX4Q8IY92 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SLX4Q8IY92 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.69■■■□□ 2.82
SLX4Q8IY92 AC120057.4-201ENST00000624722 1615 ntBASIC32.68■■■□□ 2.82
SLX4Q8IY92 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
SLX4Q8IY92 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SLX4Q8IY92 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.65■■■□□ 2.82
SLX4Q8IY92 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SLX4Q8IY92 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
SLX4Q8IY92 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SLX4Q8IY92 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
SLX4Q8IY92 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLX4Q8IY92 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLX4Q8IY92 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
SLX4Q8IY92 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.63■■■□□ 2.81
SLX4Q8IY92 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SLX4Q8IY92 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
SLX4Q8IY92 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SLX4Q8IY92 LINC00273-201ENST00000539813 1452 ntBASIC32.6■■■□□ 2.81
SLX4Q8IY92 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
SLX4Q8IY92 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.59■■■□□ 2.81
SLX4Q8IY92 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SLX4Q8IY92 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SLX4Q8IY92 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.58■■■□□ 2.81
SLX4Q8IY92 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.58■■■□□ 2.81
SLX4Q8IY92 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.58■■■□□ 2.81
SLX4Q8IY92 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
SLX4Q8IY92 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
SLX4Q8IY92 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SLX4Q8IY92 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SLX4Q8IY92 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.54■■■□□ 2.8
SLX4Q8IY92 RNF126P1-201ENST00000567452 1320 ntBASIC32.53■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms