Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
C12orf56Q8IXR9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
C12orf56Q8IXR9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.77■■■□□ 2.2
C12orf56Q8IXR9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
C12orf56Q8IXR9 DUX4L28-201ENST00000623687 678 ntBASIC28.77■■■□□ 2.2
C12orf56Q8IXR9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
C12orf56Q8IXR9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.75■■■□□ 2.19
C12orf56Q8IXR9 MIR3665-201ENST00000578708 105 ntBASIC28.75■■■□□ 2.19
C12orf56Q8IXR9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
C12orf56Q8IXR9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.74■■■□□ 2.19
C12orf56Q8IXR9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
C12orf56Q8IXR9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
C12orf56Q8IXR9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
C12orf56Q8IXR9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.72■■■□□ 2.19
C12orf56Q8IXR9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
C12orf56Q8IXR9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
C12orf56Q8IXR9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.7■■■□□ 2.19
C12orf56Q8IXR9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
C12orf56Q8IXR9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
C12orf56Q8IXR9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.69■■■□□ 2.18
C12orf56Q8IXR9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.69■■■□□ 2.18
C12orf56Q8IXR9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
C12orf56Q8IXR9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
C12orf56Q8IXR9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
C12orf56Q8IXR9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
C12orf56Q8IXR9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
C12orf56Q8IXR9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
C12orf56Q8IXR9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
C12orf56Q8IXR9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
C12orf56Q8IXR9 AL162393.1-201ENST00000437852 946 ntBASIC28.67■■■□□ 2.18
C12orf56Q8IXR9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
C12orf56Q8IXR9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
C12orf56Q8IXR9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.66■■■□□ 2.18
C12orf56Q8IXR9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
C12orf56Q8IXR9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
C12orf56Q8IXR9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
C12orf56Q8IXR9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
C12orf56Q8IXR9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
C12orf56Q8IXR9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
C12orf56Q8IXR9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
C12orf56Q8IXR9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.64■■■□□ 2.18
C12orf56Q8IXR9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
C12orf56Q8IXR9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.63■■■□□ 2.17
C12orf56Q8IXR9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
C12orf56Q8IXR9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
C12orf56Q8IXR9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
C12orf56Q8IXR9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
C12orf56Q8IXR9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.61■■■□□ 2.17
C12orf56Q8IXR9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
C12orf56Q8IXR9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
C12orf56Q8IXR9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
C12orf56Q8IXR9 AC087741.3-201ENST00000624270 1347 ntBASIC28.6■■■□□ 2.17
C12orf56Q8IXR9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.59■■■□□ 2.17
C12orf56Q8IXR9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
C12orf56Q8IXR9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.59■■■□□ 2.17
C12orf56Q8IXR9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.58■■■□□ 2.17
C12orf56Q8IXR9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
C12orf56Q8IXR9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
C12orf56Q8IXR9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.57■■■□□ 2.16
C12orf56Q8IXR9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
C12orf56Q8IXR9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
C12orf56Q8IXR9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
C12orf56Q8IXR9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.56■■■□□ 2.16
C12orf56Q8IXR9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
C12orf56Q8IXR9 ABCB10P3-201ENST00000561950 2166 ntBASIC28.55■■■□□ 2.16
C12orf56Q8IXR9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
C12orf56Q8IXR9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.55■■■□□ 2.16
C12orf56Q8IXR9 AC108673.1-201ENST00000510422 1159 ntBASIC28.54■■■□□ 2.16
C12orf56Q8IXR9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
C12orf56Q8IXR9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
C12orf56Q8IXR9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
C12orf56Q8IXR9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
C12orf56Q8IXR9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
C12orf56Q8IXR9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
C12orf56Q8IXR9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
C12orf56Q8IXR9 MIR6090-201ENST00000622481 60 ntBASIC28.49■■■□□ 2.15
C12orf56Q8IXR9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
C12orf56Q8IXR9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
C12orf56Q8IXR9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
C12orf56Q8IXR9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
C12orf56Q8IXR9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
C12orf56Q8IXR9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
C12orf56Q8IXR9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
C12orf56Q8IXR9 AC127502.1-201ENST00000399971 1502 ntBASIC28.47■■■□□ 2.15
C12orf56Q8IXR9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
C12orf56Q8IXR9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
C12orf56Q8IXR9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
C12orf56Q8IXR9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
C12orf56Q8IXR9 AL139393.2-201ENST00000608721 2025 ntBASIC28.45■■■□□ 2.14
C12orf56Q8IXR9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
C12orf56Q8IXR9 AC044849.2-201ENST00000606596 710 ntBASIC28.44■■■□□ 2.14
C12orf56Q8IXR9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
C12orf56Q8IXR9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.43■■■□□ 2.14
C12orf56Q8IXR9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
C12orf56Q8IXR9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
C12orf56Q8IXR9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.41■■■□□ 2.14
C12orf56Q8IXR9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
C12orf56Q8IXR9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
C12orf56Q8IXR9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
C12orf56Q8IXR9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms