Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CR559946.2-201ENST00000623684 991 ntBASIC23.84■■□□□ 1.41
KRTCAP3Q53RY4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRTCAP3Q53RY4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRTCAP3Q53RY4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRTCAP3Q53RY4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KRTCAP3Q53RY4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRTCAP3Q53RY4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRTCAP3Q53RY4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRTCAP3Q53RY4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRTCAP3Q53RY4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRTCAP3Q53RY4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRTCAP3Q53RY4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.78■■□□□ 1.4
KRTCAP3Q53RY4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KRTCAP3Q53RY4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
KRTCAP3Q53RY4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L13-201ENST00000554103 1267 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L15-201ENST00000611059 1267 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L23-201ENST00000615195 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L24-201ENST00000617576 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L22-201ENST00000618238 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L20-201ENST00000619712 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L21-201ENST00000622058 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L10-201ENST00000622460 1267 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 DUX4L25-201ENST00000624915 1269 ntBASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRTCAP3Q53RY4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRTCAP3Q53RY4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRTCAP3Q53RY4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRTCAP3Q53RY4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRTCAP3Q53RY4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRTCAP3Q53RY4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
KRTCAP3Q53RY4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRTCAP3Q53RY4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRTCAP3Q53RY4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
KRTCAP3Q53RY4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRTCAP3Q53RY4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRTCAP3Q53RY4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRTCAP3Q53RY4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRTCAP3Q53RY4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRTCAP3Q53RY4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRTCAP3Q53RY4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.71■■□□□ 1.39
KRTCAP3Q53RY4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.7■■□□□ 1.39
KRTCAP3Q53RY4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.7■■□□□ 1.39
KRTCAP3Q53RY4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRTCAP3Q53RY4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.69■■□□□ 1.38
KRTCAP3Q53RY4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
KRTCAP3Q53RY4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
KRTCAP3Q53RY4 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.68■■□□□ 1.38
KRTCAP3Q53RY4 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.68■■□□□ 1.38
KRTCAP3Q53RY4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRTCAP3Q53RY4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRTCAP3Q53RY4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.67■■□□□ 1.38
KRTCAP3Q53RY4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KRTCAP3Q53RY4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.66■■□□□ 1.38
KRTCAP3Q53RY4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRTCAP3Q53RY4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRTCAP3Q53RY4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.65■■□□□ 1.38
KRTCAP3Q53RY4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.65■■□□□ 1.38
KRTCAP3Q53RY4 AL161658.1-201ENST00000623641 1967 ntBASIC23.65■■□□□ 1.38
KRTCAP3Q53RY4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KRTCAP3Q53RY4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
KRTCAP3Q53RY4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.64■■□□□ 1.38
KRTCAP3Q53RY4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.64■■□□□ 1.38
KRTCAP3Q53RY4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KRTCAP3Q53RY4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.63■■□□□ 1.37
KRTCAP3Q53RY4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
KRTCAP3Q53RY4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
KRTCAP3Q53RY4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.62■■□□□ 1.37
KRTCAP3Q53RY4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.62■■□□□ 1.37
KRTCAP3Q53RY4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.61■■□□□ 1.37
KRTCAP3Q53RY4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.61■■□□□ 1.37
KRTCAP3Q53RY4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
KRTCAP3Q53RY4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KRTCAP3Q53RY4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRTCAP3Q53RY4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
KRTCAP3Q53RY4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
KRTCAP3Q53RY4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
KRTCAP3Q53RY4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRTCAP3Q53RY4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.57■■□□□ 1.36
KRTCAP3Q53RY4 LINC00273-201ENST00000539813 1452 ntBASIC23.57■■□□□ 1.36
KRTCAP3Q53RY4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
KRTCAP3Q53RY4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.55■■□□□ 1.36
KRTCAP3Q53RY4 AC010864.1-201ENST00000609407 1511 ntBASIC23.54■■□□□ 1.36
KRTCAP3Q53RY4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRTCAP3Q53RY4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRTCAP3Q53RY4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.54■■□□□ 1.36
KRTCAP3Q53RY4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRTCAP3Q53RY4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRTCAP3Q53RY4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 649.8 ms