Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CCSMST1Q4G0I0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCSMST1Q4G0I0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.66■■□□□ 1.7
CCSMST1Q4G0I0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCSMST1Q4G0I0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCSMST1Q4G0I0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.65■■□□□ 1.7
CCSMST1Q4G0I0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CCSMST1Q4G0I0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCSMST1Q4G0I0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCSMST1Q4G0I0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCSMST1Q4G0I0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCSMST1Q4G0I0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCSMST1Q4G0I0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCSMST1Q4G0I0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.63■■□□□ 1.69
CCSMST1Q4G0I0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCSMST1Q4G0I0 RPS2P35-201ENST00000443417 897 ntBASIC25.62■■□□□ 1.69
CCSMST1Q4G0I0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
CCSMST1Q4G0I0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCSMST1Q4G0I0 AC087741.3-201ENST00000624270 1347 ntBASIC25.62■■□□□ 1.69
CCSMST1Q4G0I0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCSMST1Q4G0I0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCSMST1Q4G0I0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CCSMST1Q4G0I0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCSMST1Q4G0I0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCSMST1Q4G0I0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.59■■□□□ 1.69
CCSMST1Q4G0I0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCSMST1Q4G0I0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCSMST1Q4G0I0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCSMST1Q4G0I0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCSMST1Q4G0I0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCSMST1Q4G0I0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCSMST1Q4G0I0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCSMST1Q4G0I0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCSMST1Q4G0I0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCSMST1Q4G0I0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.52■■□□□ 1.68
CCSMST1Q4G0I0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCSMST1Q4G0I0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 MIR6090-201ENST00000622481 60 ntBASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCSMST1Q4G0I0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.5■■□□□ 1.67
CCSMST1Q4G0I0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.5■■□□□ 1.67
CCSMST1Q4G0I0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCSMST1Q4G0I0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
CCSMST1Q4G0I0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCSMST1Q4G0I0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCSMST1Q4G0I0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCSMST1Q4G0I0 AC139426.1-201ENST00000568218 2529 ntBASIC25.47■■□□□ 1.67
CCSMST1Q4G0I0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CCSMST1Q4G0I0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CCSMST1Q4G0I0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCSMST1Q4G0I0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCSMST1Q4G0I0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCSMST1Q4G0I0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCSMST1Q4G0I0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCSMST1Q4G0I0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CCSMST1Q4G0I0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCSMST1Q4G0I0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCSMST1Q4G0I0 ABCB10P3-201ENST00000561950 2166 ntBASIC25.44■■□□□ 1.66
CCSMST1Q4G0I0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCSMST1Q4G0I0 AC108673.1-201ENST00000510422 1159 ntBASIC25.44■■□□□ 1.66
CCSMST1Q4G0I0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCSMST1Q4G0I0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCSMST1Q4G0I0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCSMST1Q4G0I0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCSMST1Q4G0I0 AC044849.2-201ENST00000606596 710 ntBASIC25.43■■□□□ 1.66
CCSMST1Q4G0I0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCSMST1Q4G0I0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.41■■□□□ 1.66
CCSMST1Q4G0I0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.41■■□□□ 1.66
CCSMST1Q4G0I0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.41■■□□□ 1.66
CCSMST1Q4G0I0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCSMST1Q4G0I0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCSMST1Q4G0I0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.4■■□□□ 1.66
CCSMST1Q4G0I0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CCSMST1Q4G0I0 AC127502.1-201ENST00000399971 1502 ntBASIC25.39■■□□□ 1.66
CCSMST1Q4G0I0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCSMST1Q4G0I0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
CCSMST1Q4G0I0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCSMST1Q4G0I0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms