Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H1AQ02539 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H1AQ02539 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H1AQ02539 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H1AQ02539 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H1AQ02539 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H1AQ02539 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HIST1H1AQ02539 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H1AQ02539 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H1AQ02539 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIST1H1AQ02539 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H1AQ02539 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H1AQ02539 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H1AQ02539 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H1AQ02539 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H1AQ02539 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST1H1AQ02539 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST1H1AQ02539 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.75■□□□□ 0.75
HIST1H1AQ02539 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST1H1AQ02539 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H1AQ02539 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST1H1AQ02539 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HIST1H1AQ02539 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H1AQ02539 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1AQ02539 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1AQ02539 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1AQ02539 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1AQ02539 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST1H1AQ02539 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1AQ02539 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1AQ02539 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST1H1AQ02539 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1AQ02539 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H1AQ02539 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST1H1AQ02539 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1AQ02539 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1AQ02539 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H1AQ02539 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1AQ02539 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1AQ02539 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1AQ02539 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1AQ02539 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1AQ02539 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1AQ02539 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1AQ02539 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1AQ02539 AC142086.6-201ENST00000621154 1765 ntBASIC19.65■□□□□ 0.74
HIST1H1AQ02539 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HIST1H1AQ02539 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H1AQ02539 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H1AQ02539 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H1AQ02539 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HIST1H1AQ02539 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.61■□□□□ 0.73
HIST1H1AQ02539 AC097358.2-201ENST00000607541 1159 ntBASIC19.61■□□□□ 0.73
HIST1H1AQ02539 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HIST1H1AQ02539 AL391121.1-201ENST00000607967 1349 ntBASIC19.6■□□□□ 0.73
HIST1H1AQ02539 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HIST1H1AQ02539 AC010864.1-201ENST00000609407 1511 ntBASIC19.6■□□□□ 0.73
HIST1H1AQ02539 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1AQ02539 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H1AQ02539 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1AQ02539 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1AQ02539 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H1AQ02539 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
HIST1H1AQ02539 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.58■□□□□ 0.73
HIST1H1AQ02539 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1AQ02539 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H1AQ02539 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1AQ02539 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1AQ02539 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1AQ02539 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1AQ02539 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H1AQ02539 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms