Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 DUX4L21-201ENST00000622058 1269 ntBASIC34.32■■■■□ 3.08
ATP6V1AP38606 DUX4L10-201ENST00000622460 1267 ntBASIC34.32■■■■□ 3.08
ATP6V1AP38606 DUX4L25-201ENST00000624915 1269 ntBASIC34.32■■■■□ 3.08
ATP6V1AP38606 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.08
ATP6V1AP38606 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ATP6V1AP38606 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ATP6V1AP38606 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
ATP6V1AP38606 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ATP6V1AP38606 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.3■■■■□ 3.08
ATP6V1AP38606 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC34.28■■■■□ 3.08
ATP6V1AP38606 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.26■■■■□ 3.08
ATP6V1AP38606 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.26■■■■□ 3.08
ATP6V1AP38606 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
ATP6V1AP38606 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC34.25■■■■□ 3.07
ATP6V1AP38606 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.25■■■■□ 3.07
ATP6V1AP38606 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.24■■■■□ 3.07
ATP6V1AP38606 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC34.24■■■■□ 3.07
ATP6V1AP38606 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ATP6V1AP38606 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ATP6V1AP38606 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ATP6V1AP38606 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC34.22■■■■□ 3.07
ATP6V1AP38606 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.22■■■■□ 3.07
ATP6V1AP38606 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
ATP6V1AP38606 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.2■■■■□ 3.06
ATP6V1AP38606 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
ATP6V1AP38606 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
ATP6V1AP38606 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.18■■■■□ 3.06
ATP6V1AP38606 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC34.18■■■■□ 3.06
ATP6V1AP38606 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
ATP6V1AP38606 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
ATP6V1AP38606 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
ATP6V1AP38606 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.13■■■■□ 3.05
ATP6V1AP38606 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
ATP6V1AP38606 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
ATP6V1AP38606 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
ATP6V1AP38606 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
ATP6V1AP38606 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
ATP6V1AP38606 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
ATP6V1AP38606 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
ATP6V1AP38606 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.11■■■■□ 3.05
ATP6V1AP38606 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
ATP6V1AP38606 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
ATP6V1AP38606 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.1■■■■□ 3.05
ATP6V1AP38606 AC120057.4-201ENST00000624722 1615 ntBASIC34.1■■■■□ 3.05
ATP6V1AP38606 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.1■■■■□ 3.05
ATP6V1AP38606 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC34.08■■■■□ 3.05
ATP6V1AP38606 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.08■■■■□ 3.05
ATP6V1AP38606 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.08■■■■□ 3.05
ATP6V1AP38606 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.07■■■■□ 3.04
ATP6V1AP38606 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.06■■■■□ 3.04
ATP6V1AP38606 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
ATP6V1AP38606 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.05■■■■□ 3.04
ATP6V1AP38606 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.04■■■■□ 3.04
ATP6V1AP38606 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
ATP6V1AP38606 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
ATP6V1AP38606 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.01■■■■□ 3.03
ATP6V1AP38606 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC34■■■■□ 3.03
ATP6V1AP38606 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34■■■■□ 3.03
ATP6V1AP38606 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
ATP6V1AP38606 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.97■■■■□ 3.03
ATP6V1AP38606 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.97■■■■□ 3.03
ATP6V1AP38606 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
ATP6V1AP38606 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
ATP6V1AP38606 RARRES2P2-201ENST00000394842 485 ntBASIC33.96■■■■□ 3.03
ATP6V1AP38606 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.95■■■■□ 3.03
ATP6V1AP38606 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.95■■■■□ 3.03
ATP6V1AP38606 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.95■■■■□ 3.03
ATP6V1AP38606 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.95■■■■□ 3.03
ATP6V1AP38606 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
ATP6V1AP38606 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.94■■■■□ 3.02
ATP6V1AP38606 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
ATP6V1AP38606 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.93■■■■□ 3.02
ATP6V1AP38606 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
ATP6V1AP38606 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
ATP6V1AP38606 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.93■■■■□ 3.02
ATP6V1AP38606 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
ATP6V1AP38606 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.91■■■■□ 3.02
ATP6V1AP38606 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
ATP6V1AP38606 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
ATP6V1AP38606 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
ATP6V1AP38606 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
ATP6V1AP38606 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
ATP6V1AP38606 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
ATP6V1AP38606 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
ATP6V1AP38606 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.88■■■■□ 3.01
ATP6V1AP38606 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
ATP6V1AP38606 GPX1-201ENST00000419349 1106 ntBASIC33.88■■■■□ 3.01
ATP6V1AP38606 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
ATP6V1AP38606 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.87■■■■□ 3.01
ATP6V1AP38606 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.86■■■■□ 3.01
ATP6V1AP38606 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
ATP6V1AP38606 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.86■■■■□ 3.01
ATP6V1AP38606 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.86■■■■□ 3.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms