Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CXCL1P09341 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CXCL1P09341 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CXCL1P09341 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.43■□□□□ 0.86
CXCL1P09341 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.43■□□□□ 0.86
CXCL1P09341 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.43■□□□□ 0.86
CXCL1P09341 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CXCL1P09341 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CXCL1P09341 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CXCL1P09341 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CXCL1P09341 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CXCL1P09341 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CXCL1P09341 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CXCL1P09341 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CXCL1P09341 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CXCL1P09341 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CXCL1P09341 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CXCL1P09341 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.39■□□□□ 0.85
CXCL1P09341 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL1P09341 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CXCL1P09341 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL1P09341 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXCL1P09341 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CXCL1P09341 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXCL1P09341 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CXCL1P09341 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL1P09341 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXCL1P09341 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCL1P09341 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CXCL1P09341 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCL1P09341 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCL1P09341 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCL1P09341 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCL1P09341 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCL1P09341 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCL1P09341 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CXCL1P09341 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCL1P09341 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXCL1P09341 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCL1P09341 AL449106.1-201ENST00000608517 1980 ntBASIC20.32■□□□□ 0.84
CXCL1P09341 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCL1P09341 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.31■□□□□ 0.84
CXCL1P09341 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXCL1P09341 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXCL1P09341 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCL1P09341 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCL1P09341 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CXCL1P09341 DRD5P2-201ENST00000421395 2012 ntBASIC20.3■□□□□ 0.84
CXCL1P09341 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCL1P09341 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCL1P09341 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCL1P09341 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.29■□□□□ 0.84
CXCL1P09341 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.29■□□□□ 0.84
CXCL1P09341 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCL1P09341 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.27■□□□□ 0.84
CXCL1P09341 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCL1P09341 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCL1P09341 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CXCL1P09341 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CXCL1P09341 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CXCL1P09341 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.26■□□□□ 0.83
CXCL1P09341 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CXCL1P09341 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CXCL1P09341 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CXCL1P09341 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CXCL1P09341 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CXCL1P09341 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CXCL1P09341 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.22■□□□□ 0.83
CXCL1P09341 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CXCL1P09341 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXCL1P09341 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.21■□□□□ 0.83
CXCL1P09341 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.2■□□□□ 0.83
CXCL1P09341 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.2■□□□□ 0.82
CXCL1P09341 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCL1P09341 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXCL1P09341 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.19■□□□□ 0.82
CXCL1P09341 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXCL1P09341 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXCL1P09341 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCL1P09341 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCL1P09341 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.18■□□□□ 0.82
CXCL1P09341 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CXCL1P09341 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXCL1P09341 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.18■□□□□ 0.82
CXCL1P09341 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCL1P09341 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.17■□□□□ 0.82
CXCL1P09341 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
CXCL1P09341 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCL1P09341 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
CXCL1P09341 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.15■□□□□ 0.82
CXCL1P09341 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCL1P09341 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCL1P09341 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCL1P09341 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCL1P09341 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCL1P09341 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.15■□□□□ 0.82
CXCL1P09341 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CXCL1P09341 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CXCL1P09341 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.14■□□□□ 0.81
CXCL1P09341 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms