Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
MMP2P08253 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MMP2P08253 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MMP2P08253 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MMP2P08253 AP006261.1-201ENST00000584783 668 ntBASIC26.67■■□□□ 1.86
MMP2P08253 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
MMP2P08253 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MMP2P08253 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.65■■□□□ 1.86
MMP2P08253 AL162393.1-201ENST00000437852 946 ntBASIC26.65■■□□□ 1.86
MMP2P08253 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MMP2P08253 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MMP2P08253 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MMP2P08253 MIR3665-201ENST00000578708 105 ntBASIC26.64■■□□□ 1.86
MMP2P08253 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MMP2P08253 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
MMP2P08253 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.63■■□□□ 1.85
MMP2P08253 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MMP2P08253 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
MMP2P08253 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MMP2P08253 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MMP2P08253 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.61■■□□□ 1.85
MMP2P08253 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MMP2P08253 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
MMP2P08253 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
MMP2P08253 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
MMP2P08253 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MMP2P08253 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MMP2P08253 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.59■■□□□ 1.85
MMP2P08253 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.59■■□□□ 1.85
MMP2P08253 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.59■■□□□ 1.85
MMP2P08253 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MMP2P08253 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
MMP2P08253 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
MMP2P08253 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MMP2P08253 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
MMP2P08253 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.56■■□□□ 1.84
MMP2P08253 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MMP2P08253 AC087741.3-201ENST00000624270 1347 ntBASIC26.56■■□□□ 1.84
MMP2P08253 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.55■■□□□ 1.84
MMP2P08253 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MMP2P08253 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
MMP2P08253 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MMP2P08253 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
MMP2P08253 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
MMP2P08253 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MMP2P08253 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MMP2P08253 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.53■■□□□ 1.84
MMP2P08253 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MMP2P08253 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
MMP2P08253 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MMP2P08253 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.51■■□□□ 1.83
MMP2P08253 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MMP2P08253 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.51■■□□□ 1.83
MMP2P08253 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.51■■□□□ 1.83
MMP2P08253 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MMP2P08253 ABCB10P3-201ENST00000561950 2166 ntBASIC26.51■■□□□ 1.83
MMP2P08253 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MMP2P08253 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MMP2P08253 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MMP2P08253 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
MMP2P08253 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MMP2P08253 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
MMP2P08253 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
MMP2P08253 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
MMP2P08253 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
MMP2P08253 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
MMP2P08253 MIR6090-201ENST00000622481 60 ntBASIC26.46■■□□□ 1.83
MMP2P08253 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MMP2P08253 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.46■■□□□ 1.83
MMP2P08253 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
MMP2P08253 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.46■■□□□ 1.83
MMP2P08253 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
MMP2P08253 RPS2P35-201ENST00000443417 897 ntBASIC26.45■■□□□ 1.82
MMP2P08253 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
MMP2P08253 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
MMP2P08253 AC139426.1-201ENST00000568218 2529 ntBASIC26.44■■□□□ 1.82
MMP2P08253 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
MMP2P08253 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
MMP2P08253 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
MMP2P08253 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
MMP2P08253 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
MMP2P08253 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
MMP2P08253 AC108673.1-201ENST00000510422 1159 ntBASIC26.42■■□□□ 1.82
MMP2P08253 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
MMP2P08253 AC127502.1-201ENST00000399971 1502 ntBASIC26.4■■□□□ 1.82
MMP2P08253 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
MMP2P08253 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
MMP2P08253 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
MMP2P08253 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MMP2P08253 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MMP2P08253 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.38■■□□□ 1.81
MMP2P08253 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
MMP2P08253 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP2P08253 AC044849.2-201ENST00000606596 710 ntBASIC26.37■■□□□ 1.81
MMP2P08253 AL139393.2-201ENST00000608721 2025 ntBASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms