Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 DUX4L24-201ENST00000617576 1269 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L22-201ENST00000618238 1269 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L20-201ENST00000619712 1269 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L21-201ENST00000622058 1269 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L10-201ENST00000622460 1267 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 DUX4L25-201ENST00000624915 1269 ntBASIC31.54■■■□□ 2.64
SSC5DA1L4H1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SSC5DA1L4H1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.53■■■□□ 2.64
SSC5DA1L4H1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.53■■■□□ 2.64
SSC5DA1L4H1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.52■■■□□ 2.64
SSC5DA1L4H1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SSC5DA1L4H1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SSC5DA1L4H1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.49■■■□□ 2.63
SSC5DA1L4H1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.47■■■□□ 2.63
SSC5DA1L4H1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SSC5DA1L4H1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.45■■■□□ 2.63
SSC5DA1L4H1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SSC5DA1L4H1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.44■■■□□ 2.62
SSC5DA1L4H1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SSC5DA1L4H1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SSC5DA1L4H1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
SSC5DA1L4H1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SSC5DA1L4H1 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.42■■■□□ 2.62
SSC5DA1L4H1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.42■■■□□ 2.62
SSC5DA1L4H1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.42■■■□□ 2.62
SSC5DA1L4H1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.42■■■□□ 2.62
SSC5DA1L4H1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.4■■■□□ 2.62
SSC5DA1L4H1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.39■■■□□ 2.62
SSC5DA1L4H1 AC120057.4-201ENST00000624722 1615 ntBASIC31.39■■■□□ 2.62
SSC5DA1L4H1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.39■■■□□ 2.62
SSC5DA1L4H1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
SSC5DA1L4H1 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.39■■■□□ 2.61
SSC5DA1L4H1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.38■■■□□ 2.61
SSC5DA1L4H1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SSC5DA1L4H1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
SSC5DA1L4H1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SSC5DA1L4H1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
SSC5DA1L4H1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
SSC5DA1L4H1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
SSC5DA1L4H1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SSC5DA1L4H1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SSC5DA1L4H1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.34■■■□□ 2.61
SSC5DA1L4H1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SSC5DA1L4H1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SSC5DA1L4H1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.33■■■□□ 2.61
SSC5DA1L4H1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SSC5DA1L4H1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
SSC5DA1L4H1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SSC5DA1L4H1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SSC5DA1L4H1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SSC5DA1L4H1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SSC5DA1L4H1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.31■■■□□ 2.6
SSC5DA1L4H1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.31■■■□□ 2.6
SSC5DA1L4H1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SSC5DA1L4H1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SSC5DA1L4H1 RARRES2P2-201ENST00000394842 485 ntBASIC31.29■■■□□ 2.6
SSC5DA1L4H1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.29■■■□□ 2.6
SSC5DA1L4H1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SSC5DA1L4H1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
SSC5DA1L4H1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SSC5DA1L4H1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SSC5DA1L4H1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SSC5DA1L4H1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SSC5DA1L4H1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SSC5DA1L4H1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.22■■■□□ 2.59
SSC5DA1L4H1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SSC5DA1L4H1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SSC5DA1L4H1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SSC5DA1L4H1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
SSC5DA1L4H1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
SSC5DA1L4H1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SSC5DA1L4H1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SSC5DA1L4H1 ABHD17AP5-201ENST00000580133 923 ntBASIC31.17■■■□□ 2.58
SSC5DA1L4H1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SSC5DA1L4H1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SSC5DA1L4H1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.16■■■□□ 2.58
SSC5DA1L4H1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SSC5DA1L4H1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SSC5DA1L4H1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.14■■■□□ 2.58
SSC5DA1L4H1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SSC5DA1L4H1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SSC5DA1L4H1 GPX1-201ENST00000419349 1106 ntBASIC31.13■■■□□ 2.57
SSC5DA1L4H1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.13■■■□□ 2.57
SSC5DA1L4H1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SSC5DA1L4H1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.13■■■□□ 2.57
SSC5DA1L4H1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.13■■■□□ 2.57
SSC5DA1L4H1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SSC5DA1L4H1 LINC00273-201ENST00000539813 1452 ntBASIC31.13■■■□□ 2.57
SSC5DA1L4H1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SSC5DA1L4H1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms