Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRBV7-9A0A0J9YWB2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRBV7-9A0A0J9YWB2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV7-9A0A0J9YWB2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV7-9A0A0J9YWB2 AL139393.2-201ENST00000608721 2025 ntBASIC19.45■□□□□ 0.7
TRBV7-9A0A0J9YWB2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRBV7-9A0A0J9YWB2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV7-9A0A0J9YWB2 AC142086.6-201ENST00000621154 1765 ntBASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 AC010864.1-201ENST00000609407 1511 ntBASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV7-9A0A0J9YWB2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-9A0A0J9YWB2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV7-9A0A0J9YWB2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV7-9A0A0J9YWB2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV7-9A0A0J9YWB2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV7-9A0A0J9YWB2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV7-9A0A0J9YWB2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV7-9A0A0J9YWB2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV7-9A0A0J9YWB2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV7-9A0A0J9YWB2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV7-9A0A0J9YWB2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRBV7-9A0A0J9YWB2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV7-9A0A0J9YWB2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV7-9A0A0J9YWB2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV7-9A0A0J9YWB2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV7-9A0A0J9YWB2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV7-9A0A0J9YWB2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
TRBV7-9A0A0J9YWB2 RARRES2P7-201ENST00000567349 469 ntBASIC19.38■□□□□ 0.69
TRBV7-9A0A0J9YWB2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV7-9A0A0J9YWB2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-9A0A0J9YWB2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-9A0A0J9YWB2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRBV7-9A0A0J9YWB2 SETD8P1-201ENST00000623146 1180 ntBASIC19.35■□□□□ 0.69
TRBV7-9A0A0J9YWB2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV7-9A0A0J9YWB2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV7-9A0A0J9YWB2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV7-9A0A0J9YWB2 AP004833.2-201ENST00000532228 1454 ntBASIC19.34■□□□□ 0.69
TRBV7-9A0A0J9YWB2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV7-9A0A0J9YWB2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV7-9A0A0J9YWB2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV7-9A0A0J9YWB2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV7-9A0A0J9YWB2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-9A0A0J9YWB2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-9A0A0J9YWB2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-9A0A0J9YWB2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRBV7-9A0A0J9YWB2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-9A0A0J9YWB2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV7-9A0A0J9YWB2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBV7-9A0A0J9YWB2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV7-9A0A0J9YWB2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV7-9A0A0J9YWB2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TRBV7-9A0A0J9YWB2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV7-9A0A0J9YWB2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-9A0A0J9YWB2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-9A0A0J9YWB2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-9A0A0J9YWB2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV7-9A0A0J9YWB2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV7-9A0A0J9YWB2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV7-9A0A0J9YWB2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV7-9A0A0J9YWB2 DRD5P2-201ENST00000421395 2012 ntBASIC19.26■□□□□ 0.67
TRBV7-9A0A0J9YWB2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV7-9A0A0J9YWB2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRBV7-9A0A0J9YWB2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-9A0A0J9YWB2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-9A0A0J9YWB2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRBV7-9A0A0J9YWB2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV7-9A0A0J9YWB2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV7-9A0A0J9YWB2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-9A0A0J9YWB2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms