Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MRPL35Q9NZE8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL35Q9NZE8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL35Q9NZE8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL35Q9NZE8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL35Q9NZE8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MRPL35Q9NZE8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL35Q9NZE8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL35Q9NZE8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MRPL35Q9NZE8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL35Q9NZE8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL35Q9NZE8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL35Q9NZE8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL35Q9NZE8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPL35Q9NZE8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL35Q9NZE8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MRPL35Q9NZE8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL35Q9NZE8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL35Q9NZE8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL35Q9NZE8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL35Q9NZE8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL35Q9NZE8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL35Q9NZE8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.82■□□□□ 0.6
MRPL35Q9NZE8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL35Q9NZE8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.82■□□□□ 0.6
MRPL35Q9NZE8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL35Q9NZE8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL35Q9NZE8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL35Q9NZE8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MRPL35Q9NZE8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.81■□□□□ 0.6
MRPL35Q9NZE8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL35Q9NZE8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL35Q9NZE8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MRPL35Q9NZE8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL35Q9NZE8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL35Q9NZE8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MRPL35Q9NZE8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MRPL35Q9NZE8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL35Q9NZE8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 AL121749.1-202ENST00000609313 2153 ntBASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL35Q9NZE8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRPL35Q9NZE8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL35Q9NZE8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL35Q9NZE8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL35Q9NZE8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL35Q9NZE8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL35Q9NZE8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL35Q9NZE8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL35Q9NZE8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL35Q9NZE8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.71■□□□□ 0.59
MRPL35Q9NZE8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL35Q9NZE8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL35Q9NZE8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL35Q9NZE8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
MRPL35Q9NZE8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
MRPL35Q9NZE8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL35Q9NZE8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MRPL35Q9NZE8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPL35Q9NZE8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPL35Q9NZE8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.69■□□□□ 0.58
MRPL35Q9NZE8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MRPL35Q9NZE8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MRPL35Q9NZE8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL35Q9NZE8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL35Q9NZE8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRPL35Q9NZE8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL35Q9NZE8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRPL35Q9NZE8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MRPL35Q9NZE8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL35Q9NZE8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPL35Q9NZE8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPL35Q9NZE8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MRPL35Q9NZE8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRPL35Q9NZE8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPL35Q9NZE8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MRPL35Q9NZE8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL35Q9NZE8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms