Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.37■■□□□ 1.33
RBFOX1Q9NWB1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.35■■□□□ 1.33
RBFOX1Q9NWB1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.34■■□□□ 1.33
RBFOX1Q9NWB1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RBFOX1Q9NWB1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 AC142086.6-201ENST00000621154 1765 ntBASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RBFOX1Q9NWB1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RBFOX1Q9NWB1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 AC135731.1-201ENST00000569415 2548 ntBASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBFOX1Q9NWB1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RBFOX1Q9NWB1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RBFOX1Q9NWB1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.24■■□□□ 1.31
RBFOX1Q9NWB1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RBFOX1Q9NWB1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.23■■□□□ 1.31
RBFOX1Q9NWB1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RBFOX1Q9NWB1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBFOX1Q9NWB1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBFOX1Q9NWB1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.14■■□□□ 1.3
RBFOX1Q9NWB1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RBFOX1Q9NWB1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RBFOX1Q9NWB1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 AL121749.1-202ENST00000609313 2153 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms