Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RBM28Q9NW13 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RBM28Q9NW13 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RBM28Q9NW13 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
RBM28Q9NW13 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RBM28Q9NW13 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RBM28Q9NW13 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.1■■■□□ 2.57
RBM28Q9NW13 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RBM28Q9NW13 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RBM28Q9NW13 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.09■■■□□ 2.57
RBM28Q9NW13 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RBM28Q9NW13 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.08■■■□□ 2.57
RBM28Q9NW13 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RBM28Q9NW13 MIR762-201ENST00000390236 83 ntBASIC31.07■■■□□ 2.56
RBM28Q9NW13 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RBM28Q9NW13 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RBM28Q9NW13 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RBM28Q9NW13 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.05■■■□□ 2.56
RBM28Q9NW13 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RBM28Q9NW13 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.03■■■□□ 2.56
RBM28Q9NW13 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
RBM28Q9NW13 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.03■■■□□ 2.56
RBM28Q9NW13 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.03■■■□□ 2.56
RBM28Q9NW13 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31■■■□□ 2.55
RBM28Q9NW13 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31■■■□□ 2.55
RBM28Q9NW13 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
RBM28Q9NW13 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RBM28Q9NW13 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RBM28Q9NW13 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RBM28Q9NW13 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RBM28Q9NW13 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RBM28Q9NW13 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.96■■■□□ 2.55
RBM28Q9NW13 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
RBM28Q9NW13 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
RBM28Q9NW13 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RBM28Q9NW13 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.95■■■□□ 2.55
RBM28Q9NW13 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RBM28Q9NW13 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
RBM28Q9NW13 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.94■■■□□ 2.54
RBM28Q9NW13 AC005559.1-201ENST00000589661 871 ntBASIC30.92■■■□□ 2.54
RBM28Q9NW13 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
RBM28Q9NW13 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RBM28Q9NW13 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
RBM28Q9NW13 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RBM28Q9NW13 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
RBM28Q9NW13 AP006261.1-201ENST00000584783 668 ntBASIC30.91■■■□□ 2.54
RBM28Q9NW13 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RBM28Q9NW13 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RBM28Q9NW13 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.9■■■□□ 2.54
RBM28Q9NW13 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.89■■■□□ 2.54
RBM28Q9NW13 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.88■■■□□ 2.53
RBM28Q9NW13 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RBM28Q9NW13 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RBM28Q9NW13 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
RBM28Q9NW13 AL135925.1-201ENST00000605920 1701 ntBASIC30.85■■■□□ 2.53
RBM28Q9NW13 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.85■■■□□ 2.53
RBM28Q9NW13 MIR3665-201ENST00000578708 105 ntBASIC30.85■■■□□ 2.53
RBM28Q9NW13 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
RBM28Q9NW13 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RBM28Q9NW13 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.84■■■□□ 2.53
RBM28Q9NW13 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RBM28Q9NW13 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RBM28Q9NW13 DUX4L28-201ENST00000623687 678 ntBASIC30.83■■■□□ 2.53
RBM28Q9NW13 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RBM28Q9NW13 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.81■■■□□ 2.52
RBM28Q9NW13 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.8■■■□□ 2.52
RBM28Q9NW13 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RBM28Q9NW13 AL162393.1-201ENST00000437852 946 ntBASIC30.78■■■□□ 2.52
RBM28Q9NW13 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.78■■■□□ 2.52
RBM28Q9NW13 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.78■■■□□ 2.52
RBM28Q9NW13 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RBM28Q9NW13 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.52
RBM28Q9NW13 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
RBM28Q9NW13 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
RBM28Q9NW13 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.75■■■□□ 2.51
RBM28Q9NW13 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
RBM28Q9NW13 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.74■■■□□ 2.51
RBM28Q9NW13 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RBM28Q9NW13 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RBM28Q9NW13 AC010864.1-201ENST00000609407 1511 ntBASIC30.73■■■□□ 2.51
RBM28Q9NW13 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RBM28Q9NW13 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RBM28Q9NW13 ST7-AS1-201ENST00000456775 1889 ntBASIC30.73■■■□□ 2.51
RBM28Q9NW13 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RBM28Q9NW13 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.72■■■□□ 2.51
RBM28Q9NW13 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RBM28Q9NW13 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RBM28Q9NW13 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RBM28Q9NW13 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RBM28Q9NW13 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RBM28Q9NW13 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.7■■■□□ 2.51
RBM28Q9NW13 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.7■■■□□ 2.5
RBM28Q9NW13 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RBM28Q9NW13 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
RBM28Q9NW13 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
RBM28Q9NW13 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.68■■■□□ 2.5
RBM28Q9NW13 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RBM28Q9NW13 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RBM28Q9NW13 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.66■■■□□ 2.5
RBM28Q9NW13 AC087741.3-201ENST00000624270 1347 ntBASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms