Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SND1-IT1Q9HBX3 ST7-AS1-201ENST00000456775 1889 ntBASIC17.71■□□□□ 0.43
SND1-IT1Q9HBX3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.7■□□□□ 0.42
SND1-IT1Q9HBX3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SND1-IT1Q9HBX3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.7■□□□□ 0.42
SND1-IT1Q9HBX3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.7■□□□□ 0.42
SND1-IT1Q9HBX3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SND1-IT1Q9HBX3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SND1-IT1Q9HBX3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SND1-IT1Q9HBX3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SND1-IT1Q9HBX3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SND1-IT1Q9HBX3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SND1-IT1Q9HBX3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.68■□□□□ 0.42
SND1-IT1Q9HBX3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SND1-IT1Q9HBX3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.68■□□□□ 0.42
SND1-IT1Q9HBX3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SND1-IT1Q9HBX3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SND1-IT1Q9HBX3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SND1-IT1Q9HBX3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SND1-IT1Q9HBX3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SND1-IT1Q9HBX3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SND1-IT1Q9HBX3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SND1-IT1Q9HBX3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SND1-IT1Q9HBX3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SND1-IT1Q9HBX3 AC142086.6-201ENST00000621154 1765 ntBASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 AC006077.2-201ENST00000623591 457 ntBASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SND1-IT1Q9HBX3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SND1-IT1Q9HBX3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SND1-IT1Q9HBX3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SND1-IT1Q9HBX3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SND1-IT1Q9HBX3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SND1-IT1Q9HBX3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SND1-IT1Q9HBX3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
SND1-IT1Q9HBX3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SND1-IT1Q9HBX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.58■□□□□ 0.41
SND1-IT1Q9HBX3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.58■□□□□ 0.4
SND1-IT1Q9HBX3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SND1-IT1Q9HBX3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SND1-IT1Q9HBX3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SND1-IT1Q9HBX3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SND1-IT1Q9HBX3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SND1-IT1Q9HBX3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SND1-IT1Q9HBX3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SND1-IT1Q9HBX3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SND1-IT1Q9HBX3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SND1-IT1Q9HBX3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SND1-IT1Q9HBX3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SND1-IT1Q9HBX3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SND1-IT1Q9HBX3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SND1-IT1Q9HBX3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SND1-IT1Q9HBX3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SND1-IT1Q9HBX3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SND1-IT1Q9HBX3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SND1-IT1Q9HBX3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SND1-IT1Q9HBX3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SND1-IT1Q9HBX3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SND1-IT1Q9HBX3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SND1-IT1Q9HBX3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SND1-IT1Q9HBX3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SND1-IT1Q9HBX3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SND1-IT1Q9HBX3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SND1-IT1Q9HBX3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SND1-IT1Q9HBX3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.46■□□□□ 0.39
SND1-IT1Q9HBX3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SND1-IT1Q9HBX3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SND1-IT1Q9HBX3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SND1-IT1Q9HBX3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 515.5 ms