Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
RNF139Q8WU17 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RNF139Q8WU17 RPS2P35-201ENST00000443417 897 ntBASIC28■■■□□ 2.07
RNF139Q8WU17 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28■■■□□ 2.07
RNF139Q8WU17 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF139Q8WU17 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.99■■■□□ 2.07
RNF139Q8WU17 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RNF139Q8WU17 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
RNF139Q8WU17 DUX4L28-201ENST00000623687 678 ntBASIC27.97■■■□□ 2.07
RNF139Q8WU17 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.97■■■□□ 2.07
RNF139Q8WU17 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.96■■■□□ 2.07
RNF139Q8WU17 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
RNF139Q8WU17 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RNF139Q8WU17 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RNF139Q8WU17 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.95■■■□□ 2.07
RNF139Q8WU17 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RNF139Q8WU17 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RNF139Q8WU17 AL161658.1-201ENST00000623641 1967 ntBASIC27.95■■■□□ 2.06
RNF139Q8WU17 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.95■■■□□ 2.06
RNF139Q8WU17 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF139Q8WU17 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF139Q8WU17 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF139Q8WU17 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.93■■■□□ 2.06
RNF139Q8WU17 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RNF139Q8WU17 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RNF139Q8WU17 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RNF139Q8WU17 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNF139Q8WU17 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.92■■■□□ 2.06
RNF139Q8WU17 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNF139Q8WU17 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.91■■■□□ 2.06
RNF139Q8WU17 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RNF139Q8WU17 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RNF139Q8WU17 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.89■■■□□ 2.06
RNF139Q8WU17 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
RNF139Q8WU17 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RNF139Q8WU17 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF139Q8WU17 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
RNF139Q8WU17 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RNF139Q8WU17 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF139Q8WU17 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.86■■■□□ 2.05
RNF139Q8WU17 AC087741.3-201ENST00000624270 1347 ntBASIC27.85■■■□□ 2.05
RNF139Q8WU17 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RNF139Q8WU17 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RNF139Q8WU17 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RNF139Q8WU17 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF139Q8WU17 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF139Q8WU17 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
RNF139Q8WU17 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNF139Q8WU17 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RNF139Q8WU17 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNF139Q8WU17 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RNF139Q8WU17 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.81■■■□□ 2.04
RNF139Q8WU17 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.81■■■□□ 2.04
RNF139Q8WU17 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RNF139Q8WU17 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
RNF139Q8WU17 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.79■■■□□ 2.04
RNF139Q8WU17 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RNF139Q8WU17 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
RNF139Q8WU17 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RNF139Q8WU17 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RNF139Q8WU17 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RNF139Q8WU17 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RNF139Q8WU17 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.78■■■□□ 2.04
RNF139Q8WU17 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.78■■■□□ 2.04
RNF139Q8WU17 AC044849.2-201ENST00000606596 710 ntBASIC27.78■■■□□ 2.04
RNF139Q8WU17 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RNF139Q8WU17 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RNF139Q8WU17 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RNF139Q8WU17 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.77■■■□□ 2.04
RNF139Q8WU17 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RNF139Q8WU17 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
RNF139Q8WU17 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
RNF139Q8WU17 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.75■■■□□ 2.03
RNF139Q8WU17 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.75■■■□□ 2.03
RNF139Q8WU17 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RNF139Q8WU17 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RNF139Q8WU17 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.73■■■□□ 2.03
RNF139Q8WU17 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RNF139Q8WU17 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RNF139Q8WU17 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
RNF139Q8WU17 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RNF139Q8WU17 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.7■■■□□ 2.02
RNF139Q8WU17 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RNF139Q8WU17 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
RNF139Q8WU17 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.69■■■□□ 2.02
RNF139Q8WU17 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF139Q8WU17 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
RNF139Q8WU17 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RNF139Q8WU17 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RNF139Q8WU17 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
RNF139Q8WU17 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RNF139Q8WU17 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF139Q8WU17 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
RNF139Q8WU17 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.63■■■□□ 2.01
RNF139Q8WU17 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RNF139Q8WU17 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RNF139Q8WU17 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
RNF139Q8WU17 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RNF139Q8WU17 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.62■■■□□ 2.01
RNF139Q8WU17 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms