Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDH20Q8N6Y1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH20Q8N6Y1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH20Q8N6Y1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH20Q8N6Y1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCDH20Q8N6Y1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH20Q8N6Y1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH20Q8N6Y1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH20Q8N6Y1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH20Q8N6Y1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDH20Q8N6Y1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH20Q8N6Y1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH20Q8N6Y1 AC087741.3-201ENST00000624270 1347 ntBASIC27.17■■□□□ 1.94
PCDH20Q8N6Y1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH20Q8N6Y1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH20Q8N6Y1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDH20Q8N6Y1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
PCDH20Q8N6Y1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH20Q8N6Y1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH20Q8N6Y1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH20Q8N6Y1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
PCDH20Q8N6Y1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH20Q8N6Y1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDH20Q8N6Y1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH20Q8N6Y1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDH20Q8N6Y1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
PCDH20Q8N6Y1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDH20Q8N6Y1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDH20Q8N6Y1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDH20Q8N6Y1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH20Q8N6Y1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.09■■□□□ 1.93
PCDH20Q8N6Y1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.09■■□□□ 1.93
PCDH20Q8N6Y1 AC044849.2-201ENST00000606596 710 ntBASIC27.09■■□□□ 1.93
PCDH20Q8N6Y1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDH20Q8N6Y1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDH20Q8N6Y1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDH20Q8N6Y1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDH20Q8N6Y1 AL161658.1-201ENST00000623641 1967 ntBASIC27.06■■□□□ 1.92
PCDH20Q8N6Y1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDH20Q8N6Y1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PCDH20Q8N6Y1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH20Q8N6Y1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDH20Q8N6Y1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDH20Q8N6Y1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH20Q8N6Y1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH20Q8N6Y1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH20Q8N6Y1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH20Q8N6Y1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PCDH20Q8N6Y1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PCDH20Q8N6Y1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
PCDH20Q8N6Y1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27■■□□□ 1.91
PCDH20Q8N6Y1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH20Q8N6Y1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PCDH20Q8N6Y1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.98■■□□□ 1.91
PCDH20Q8N6Y1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH20Q8N6Y1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDH20Q8N6Y1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH20Q8N6Y1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH20Q8N6Y1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDH20Q8N6Y1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH20Q8N6Y1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
PCDH20Q8N6Y1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDH20Q8N6Y1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDH20Q8N6Y1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDH20Q8N6Y1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDH20Q8N6Y1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDH20Q8N6Y1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
PCDH20Q8N6Y1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDH20Q8N6Y1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDH20Q8N6Y1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDH20Q8N6Y1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH20Q8N6Y1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDH20Q8N6Y1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH20Q8N6Y1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDH20Q8N6Y1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH20Q8N6Y1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
PCDH20Q8N6Y1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDH20Q8N6Y1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH20Q8N6Y1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH20Q8N6Y1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH20Q8N6Y1 AC108673.1-201ENST00000510422 1159 ntBASIC26.87■■□□□ 1.89
PCDH20Q8N6Y1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDH20Q8N6Y1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH20Q8N6Y1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH20Q8N6Y1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.85■■□□□ 1.89
PCDH20Q8N6Y1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH20Q8N6Y1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH20Q8N6Y1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH20Q8N6Y1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms