Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPNE9Q8IYJ1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPNE9Q8IYJ1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPNE9Q8IYJ1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.27■■□□□ 1.8
CPNE9Q8IYJ1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPNE9Q8IYJ1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPNE9Q8IYJ1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPNE9Q8IYJ1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPNE9Q8IYJ1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.25■■□□□ 1.79
CPNE9Q8IYJ1 AL391121.1-201ENST00000607967 1349 ntBASIC26.24■■□□□ 1.79
CPNE9Q8IYJ1 CAHM-201ENST00000604200 896 ntBASIC26.24■■□□□ 1.79
CPNE9Q8IYJ1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE9Q8IYJ1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CPNE9Q8IYJ1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE9Q8IYJ1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPNE9Q8IYJ1 ST7-AS1-201ENST00000456775 1889 ntBASIC26.22■■□□□ 1.79
CPNE9Q8IYJ1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.22■■□□□ 1.79
CPNE9Q8IYJ1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.22■■□□□ 1.79
CPNE9Q8IYJ1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CPNE9Q8IYJ1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CPNE9Q8IYJ1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CPNE9Q8IYJ1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.2■■□□□ 1.78
CPNE9Q8IYJ1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.2■■□□□ 1.78
CPNE9Q8IYJ1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CPNE9Q8IYJ1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CPNE9Q8IYJ1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.19■■□□□ 1.78
CPNE9Q8IYJ1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPNE9Q8IYJ1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
CPNE9Q8IYJ1 AL135925.1-201ENST00000605920 1701 ntBASIC26.19■■□□□ 1.78
CPNE9Q8IYJ1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE9Q8IYJ1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE9Q8IYJ1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE9Q8IYJ1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CPNE9Q8IYJ1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPNE9Q8IYJ1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE9Q8IYJ1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE9Q8IYJ1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE9Q8IYJ1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE9Q8IYJ1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE9Q8IYJ1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPNE9Q8IYJ1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPNE9Q8IYJ1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.77
CPNE9Q8IYJ1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CPNE9Q8IYJ1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CPNE9Q8IYJ1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CPNE9Q8IYJ1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE9Q8IYJ1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE9Q8IYJ1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE9Q8IYJ1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CPNE9Q8IYJ1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CPNE9Q8IYJ1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CPNE9Q8IYJ1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.11■■□□□ 1.77
CPNE9Q8IYJ1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CPNE9Q8IYJ1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CPNE9Q8IYJ1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CPNE9Q8IYJ1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CPNE9Q8IYJ1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPNE9Q8IYJ1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CPNE9Q8IYJ1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.08■■□□□ 1.77
CPNE9Q8IYJ1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CPNE9Q8IYJ1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CPNE9Q8IYJ1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE9Q8IYJ1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE9Q8IYJ1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.06■■□□□ 1.76
CPNE9Q8IYJ1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CPNE9Q8IYJ1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CPNE9Q8IYJ1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CPNE9Q8IYJ1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CPNE9Q8IYJ1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPNE9Q8IYJ1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.04■■□□□ 1.76
CPNE9Q8IYJ1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPNE9Q8IYJ1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPNE9Q8IYJ1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CPNE9Q8IYJ1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.03■■□□□ 1.76
CPNE9Q8IYJ1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.03■■□□□ 1.76
CPNE9Q8IYJ1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CPNE9Q8IYJ1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CPNE9Q8IYJ1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CPNE9Q8IYJ1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26■■□□□ 1.75
CPNE9Q8IYJ1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CPNE9Q8IYJ1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CPNE9Q8IYJ1 AC139426.1-201ENST00000568218 2529 ntBASIC25.99■■□□□ 1.75
CPNE9Q8IYJ1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE9Q8IYJ1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE9Q8IYJ1 SUZ12P1-203ENST00000578195 985 ntBASIC25.99■■□□□ 1.75
CPNE9Q8IYJ1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE9Q8IYJ1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.98■■□□□ 1.75
CPNE9Q8IYJ1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.97■■□□□ 1.75
CPNE9Q8IYJ1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CPNE9Q8IYJ1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.96■■□□□ 1.75
CPNE9Q8IYJ1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CPNE9Q8IYJ1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CPNE9Q8IYJ1 AC010864.1-201ENST00000609407 1511 ntBASIC25.95■■□□□ 1.74
CPNE9Q8IYJ1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE9Q8IYJ1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms